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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTCACTATACTGGGACGTTGCTTGATGGCACGAAGTTTGACTCTAGCAGAGATAGGGGAACTCCTTTCAGTTTCACGCTTGGACAAGgtgggtgccttattttatttttgagaactgttggtgttgtgactgatagtgagtgtttggttggtaatcaagtggatttaactattagcatttcagtgtg...

Basic information

species Glycine max
transcript GLYMA16G10730.2
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209706890|gb|BW661500.1|BW661500
EST:     TGACTCTAGCAGAGATAGGGGAACTCCTTTCAGTTTCACGCTTGGACAAG                         GGCAAGTTATTAAAGGATGGGATCAAGGTATTATAACAATGAAGAAAGGTG
genomic: TGACTCTAGCAGAGATAGGGGAACTCCTTTCAGTTTCACGCTTGGACAAGgtgggtgcct ... ggaaatgcagGGCAAGTTATTAAAGGATGGGATCAAGGTATTATAACAATGAAGAAAGGTG
EST: gi|19452637|gb|BM954047.1|BM954047
EST:     TGACTCTAGCAGAGATAGGGGAACTCCTTTCAGTTTCACGCTTGGACAAG                         GGCAAGTTATTAAAGGATGGGATCAAGGTATTATAACAATGAAGAAAGGTG
genomic: TGACTCTAGCAGAGATAGGGGAACTCCTTTCAGTTTCACGCTTGGACAAGgtgggtgcct ... ggaaatgcagGGCAAGTTATTAAAGGATGGGATCAAGGTATTATAACAATGAAGAAAGGTG
EST: gi|23726218|gb|BU761093.1|BU761093
EST:     TGACTCTAGCAGAGATAGGGGAACTCCTTTCAGTTTCACGCTTGGACAAG                         GGCAAGTTATTAAAGGATGGGATCAAGGTATTATAACAATGAAGAAAGGTG
genomic: TGACTCTAGCAGAGATAGGGGAACTCCTTTCAGTTTCACGCTTGGACAAGgtgggtgcct ... ggaaatgcagGGCAAGTTATTAAAGGATGGGATCAAGGTATTATAACAATGAAGAAAGGTG
EST: gi|23731786|gb|BU764037.1|BU764037
EST:     TGACTCTAGCAGAGATAGGGGAACTCCTTTCAGTTTCACGCTTGGACAAG                         GGCAAGTTATTAAAGGATGGGATCAAGGTATTATAACAATGAAGAAAGGTG
genomic: TGACTCTAGCAGAGATAGGGGAACTCCTTTCAGTTTCACGCTTGGACAAGgtgggtgcct ... ggaaatgcagGGCAAGTTATTAAAGGATGGGATCAAGGTATTATAACAATGAAGAAAGGTG