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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTATTTACCAATGCCTCGGGTTGTAATTTAAAATCCAAGGGATTACAGACCAGCATTTTTGGTACTTCAATTCAATGTGACTCCTTAGTCTTACAgttgagtagctcaaacttttttacctagtgctcttctctttagtgtgcctgtttcggttcctttaatagtatgtggttttatacacag

Basic information

species Glycine max
transcript GLYMA16G09020.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254326010|gb|GR838891.1|GR838891
EST:     CAGACCAGCATTTTTGGTACTTCAATTCAATGTGACTCCTTAGTCTTACA                         AAATTGCAATGCTCGTCACATCCAGCGTATTAAAGCCACAGCAACGGAAAT
genomic: CAGACCAGCATTTTTGGTACTTCAATTCAATGTGACTCCTTAGTCTTACAgttgagtagc ... ttatacacagAAATTGCAATGCTCGTCACATCCAGCGTATTAAAGCCACAGCAACGGAAAT
EST: gi|254346561|gb|GR856283.1|GR856283
EST:     CAGACCAGCATTTTTGGTACTTCAATTCAATGTGACTCCTTAGTCTTACA                         AAATTGCAATGCTCGTCACATCCAGCGTATTAAAGCCACAGCAACGGAAAT
genomic: CAGACCAGCATTTTTGGTACTTCAATTCAATGTGACTCCTTAGTCTTACAgttgagtagc ... ttatacacagAAATTGCAATGCTCGTCACATCCAGCGTATTAAAGCCACAGCAACGGAAAT