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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CAAGTTAAGAGGCCAATTGCTGAAACGAGGGTTTGGAAAAGATGATTCCCAAATTGTAAAAAGCCGTCTGCGTATACCAATGAAGGGACGGATTCAACTGgtattgatatacttgtttcactgttataagttttaacccttgtatctgagtgccttcagatgaatctgttagagccttcatttcatatctgcaggagaag...

Basic information

species Glycine max
transcript GLYMA16G05600.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|207694695|gb|GD676554.1|GD676554
EST:     AAATTGTAAAAAGCCGTCTGCGTATACCAATGAAGGGACGGATTCAACTG                         GTGCTAAGCAATCCAGAAAAGACTCCTCTTCACACTTTCTTTTGCAACTAT
genomic: AAATTGTAAAAAGCCGTCTGCGTATACCAATGAAGGGACGGATTCAACTGgtattgatat ... cactctgcagGTGCTAAGCAATCCAGAAAAGACTCCTCTTCACACTTTCTTTTGCAACTAT
EST: gi|207779438|gb|GD754580.1|GD754580
EST:     AAATTGTAAAAAGCCGTCTGCGTATACCAATGAAGGGACGGATTCAACTG                         GTGCTAAGCAATCCAGAAAAGACTC
genomic: AAATTGTAAAAAGCCGTCTGCGTATACCAATGAAGGGACGGATTCAACTGgtattgatat ... cactctgcagGTGCTAAGCAATCCAGAAAAGACTC
EST: gi|10236779|gb|BE805667.1|BE805667
EST:     AAATTGTAAAAAGCCGTCTGCGTATACCAATGAAGGGACGGATTCAACTG                         GTGCTAAGCAATCCAGAAAAGACTCCTCTTCACACTTTCTTTTGCAACTAT
genomic: AAATTGTAAAAAGCCGTCTGCGTATACCAATGAAGGGACGGATTCAACTGgtattgatat ... cactctgcagGTGCTAAGCAATCCAGAAAAGACTCCTCTTCACACTTTCTTTTGCAACTAT
EST: gi|207709012|gb|GD690512.1|GD690512
EST:     AAATTGTAAAAAGCCGTCTGCGTATACCAATGAAGGGACGGATTCAACTG                         GTGCTAAGCAATCCAGAAAAGACTCCTCTTCACACTTTCTTTTGCAACTAT
genomic: AAATTGTAAAAAGCCGTCTGCGTATACCAATGAAGGGACGGATTCAACTGgtattgatat ... cactctgcagGTGCTAAGCAATCCAGAAAAGACTCCTCTTCACACTTTCTTTTGCAACTAT
EST: gi|208095431|gb|GD896627.1|GD896627
EST:     AAATTGTAAAAAGCCGTCTGCGTATACCAATGAAGGGACGGATTCAACTG                         GTGCTAAGCAATCCAGAAAAG-CTCCTCTTCACACTTTTCTTTTGCAACTA
genomic: AAATTGTAAAAAGCCGTCTGCGTATACCAATGAAGGGACGGATTCAACTGgtattgatat ... cactctgcagGTGCTAAGCAATCCAGAAAAGACTCCTCTTCACACTTT-CTTTTGCAACTA
EST: gi|192312930|gb|FK005486.1|FK005486
EST:     AAATTGTAAAAAGCCGTCTGCGTATACCAATGAAGGGACGGATTCAACTG                         GTGCTAAGCAATCCAGAAAAGACTCCTCTTCACACTTTCTTTTGCAACTAT
genomic: AAATTGTAAAAAGCCGTCTGCGTATACCAATGAAGGGACGGATTCAACTGgtattgatat ... cactctgcagGTGCTAAGCAATCCAGAAAAGACTCCTCTTCACACTTTCTTTTGCAACTAT
EST: gi|10236805|gb|BE805693.1|BE805693
EST:     AAATTGTAAAAAGCCGTCTGCGTATACCAATGAAGGGACGGATTCAACTG                         GTGCTAAGCAATCCAGAAAAGACTCCTCTTCACACTTTCTTTTGCAACTAT
genomic: AAATTGTAAAAAGCCGTCTGCGTATACCAATGAAGGGACGGATTCAACTGgtattgatat ... cactctgcagGTGCTAAGCAATCCAGAAAAGACTCCTCTTCACACTTTCTTTTGCAACTAT
EST: gi|208117929|gb|GD915077.1|GD915077
EST:     AAATTGTAAAAAGCCGTCTGCGTATACCAATGAAGGGACGGATTCAACTG                         GTGCTAAGCAATCCAGAAAAGACTCCTCTTCACACTTTCTTTTGCAACTAT
genomic: AAATTGTAAAAAGCCGTCTGCGTATACCAATGAAGGGACGGATTCAACTGgtattgatat ... cactctgcagGTGCTAAGCAATCCAGAAAAGACTCCTCTTCACACTTTCTTTTGCAACTAT