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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTTTGATGCTGGTAGCACTGGTAGCCGTGTGCATGTCTTCCATTTCGACCAGAACTTGGATCTCCTTCGTATTGGCAACGAACTCGAGTTTTATGATAAGgtcaaaactactaattcataagctacagttatatttaacgaatacttacaacactctttctactaaaattcattagaagtcgcaaattttagtagttttc...

Basic information

species Glycine max
transcript GLYMA16G04750.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|6566641|gb|AW234282.1|AW234282
EST:     AGAACTTGGATCTCCTTCATATTGGCAACGAACTCNAGTTTTATGATAAG                         GTAACACCCGGTTTGAGTGCATACACANATAATCCTCAACAAGCTGCAGAA
genomic: AGAACTTGGATCTCCTTCGTATTGGCAACGAACTCGAGTTTTATGATAAGgtcaaaacta ... tgtggtgtagGTAACACCCGGTTTGAGTGCATACGCAGATAATCCTCAACAAGCTGCAGAA
EST: gi|213607163|gb|DB967012.1|DB967012
EST:     AGAACTTGGATCTCCTTCGTATTGGCAACGAACTCGAGTTTTATGATAAG                         GTAACACCCGGTTTGAGTGCATACGCAGATAATCCTCAACAAGCTGCAGAA
genomic: AGAACTTGGATCTCCTTCGTATTGGCAACGAACTCGAGTTTTATGATAAGgtcaaaacta ... tgtggtgtagGTAACACCCGGTTTGAGTGCATACGCAGATAATCCTCAACAAGCTGCAGAA
EST: gi|192323530|gb|FK017111.1|FK017111
EST:     AGAACTTGGATCTCCTTCGTATTGGCAACGAACTCGAGTTTTATGATAAG                         GTAACACCCGGTTTGAGTGCATACGCAGATAATCCTCAACAAGCTGCAGAA
genomic: AGAACTTGGATCTCCTTCGTATTGGCAACGAACTCGAGTTTTATGATAAGgtcaaaacta ... tgtggtgtagGTAACACCCGGTTTGAGTGCATACGCAGATAATCCTCAACAAGCTGCAGAA
EST: gi|192331687|gb|FK019992.1|FK019992
EST:     AGAACTTGGATCTCCTTCGTATTGGCAACGAACTCGAGTTTTATGATAAG                         GTAACACCCGGTTTGAGTGCATACGCAGATAATCCTCAACAAGCTGCAGAA
genomic: AGAACTTGGATCTCCTTCGTATTGGCAACGAACTCGAGTTTTATGATAAGgtcaaaacta ... tgtggtgtagGTAACACCCGGTTTGAGTGCATACGCAGATAATCCTCAACAAGCTGCAGAA
EST: gi|6566238|gb|AW233919.1|AW233919
EST:     AGAACTTGGATCTCCTTCGTATTGGCAACGAACTCGAGTTTTATGATAAG                         GTAACACCCGGTTTGAGTGCATACGCAGATAATCCTCAACAAGCTGCAGAA
genomic: AGAACTTGGATCTCCTTCGTATTGGCAACGAACTCGAGTTTTATGATAAGgtcaaaacta ... tgtggtgtagGTAACACCCGGTTTGAGTGCATACGCAGATAATCCTCAACAAGCTGCAGAA