1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GATCTCATATTAACAGAAGTGGAGCTACCAGCAATATCTGGATTTGCTCTTCTTTCTTTAATCATGGAGCATGACATTTGTAAAAGCATTCCTGTCATAAgtatgttgacttgttattatgtatttgttatcttagtctcagtgtaagatcgaaatggttaatgagctcattttattctcatgggtgtgcag
species | Glycine max |
transcript | GLYMA16G02050.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TCTTTCTTTAATCATGGAGCATGACATTTGTAAAAGCATTCCTGTCATAA TGATGTCTTCTCATGATTCGGTTAACATGGCGTTGAAATGCATGTTAAACGEST: gi|209700773|gb|BW661230.1|BW661230
genomic: TCTTTCTTTAATCATGGAGCATGACATTTGTAAAAGCATTCCTGTCATAAgtatgttgac ... gggtgtgcagTGATGTCTTCTCATGATTCGGTTAACATGGCGTTGAAATGCATGTTAAACG
EST: GGAGCATGACATTTGTAAAAGCATTCCTGTCATAA TGATGTCTTCTCATGATTCGGTTAACATGGCGTTGAAATGCATGTTAAACGEST: gi|209700772|gb|BW661229.1|BW661229
genomic: GGAGCATGACATTTGTAAAAGCATTCCTGTCATAAgtatgttgac ... gggtgtgcagTGATGTCTTCTCATGATTCGGTTAACATGGCGTTGAAATGCATGTTAAACG
EST: TCTTTCTTTAATCATGGAGCATGACATTTGTAAAAGCATTCCTGTCATAA TGATGTCTTCTCATGATTCGGTTAACATGGCGTTGAAATGCATGTTAAAC
genomic: TCTTTCTTTAATCATGGAGCATGACATTTGTAAAAGCATTCCTGTCATAAgtatgttgac ... gggtgtgcagTGATGTCTTCTCATGATTCGGTTAACATGGCGTTGAAATGCATGTTAAAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATCTCATATTAACAGAAGTGGAGCTACCAGCAATATCTGGATTTGCTCTTCTTTCTTTAATCATGGAGCATGACATTTGTAAAAGCATTCCTGTCATAAgtatgttgacttgttattatgtatttgttatcttagtctcagtgtaagatcgaaatggttaatgagctcattttattctcatgggtgtgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA