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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTGAACTCAATGGGCAAGTGATCCGTATGAAATCATTTCGTGACTATGCTGATCTTTACCTCAAATCAGCAGAGAAATCCAGACCAGTGCCTCTTCCAAGgtttgtctctatgaaatgtttgtggagctagagttttttcttctttcctttattgctaatggttttgttaatgttaatag

Basic information

species Glycine max
transcript GLYMA15G43170.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208067550|gb|GD865638.1|GD865638
EST:     GATCTTTACCTCAAATCAGCAGAGAAATCCAGACCAGTGCCTCTTCCAAG                         GATTCATGCAAAAGTAGGTGAAAGGTGGGAGATTTGCGTGAGTCTAAGTGA
genomic: GATCTTTACCTCAAATCAGCAGAGAAATCCAGACCAGTGCCTCTTCCAAGgtttgtctct ... atgttaatagGATTCATGCAAAAGTAGGTGAAAGGTGGGAGATTTGCGTGAGTCTAAGTGA
EST: gi|208067757|gb|GD866125.1|GD866125
EST:     GATCTTTACCTCAAATCAGCAGAGAAATCCAGACCAGTGCCTCTTCCAAG                         GATTCATGCAAAAGTAGGTGAAAGGTGGGAGATTTGCGTGAGTCTAAGTGA
genomic: GATCTTTACCTCAAATCAGCAGAGAAATCCAGACCAGTGCCTCTTCCAAGgtttgtctct ... atgttaatagGATTCATGCAAAAGTAGGTGAAAGGTGGGAGATTTGCGTGAGTCTAAGTGA
EST: gi|193484514|gb|FK451164.1|FK451164
EST:     GATCTTTACCTCAAATCAGCAGAGAAATCCAGACCAGTGCCTCTTCCAAG                         GATTCATGCAAAAGTAGGTGAAAGGTGGGAGATTTGCGTGAGTCTAAGTGA
genomic: GATCTTTACCTCAAATCAGCAGAGAAATCCAGACCAGTGCCTCTTCCAAGgtttgtctct ... atgttaatagGATTCATGCAAAAGTAGGTGAAAGGTGGGAGATTTGCGTGAGTCTAAGTGA
EST: gi|208124624|gb|GD921550.1|GD921550
EST:     GATCTTTACCTCAAATCAGCAGAGAAATCCAGACCAGTGCCTCTTCCAAG                         GATTCATGCAAAAGTAGGTGAAAGGTGGGAGATTTGCGTGAGTCTAAGTGA
genomic: GATCTTTACCTCAAATCAGCAGAGAAATCCAGACCAGTGCCTCTTCCAAGgtttgtctct ... atgttaatagGATTCATGCAAAAGTAGGTGAAAGGTGGGAGATTTGCGTGAGTCTAAGTGA