1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
ATCGAGGGCGTGGTCTGTTTGATTTGAACTGAATTTCGGATTGAAGGATCTCATTTTCTTGGAGCATTAAAGCAGAAATTTCTAGgtaaggttattgattgtgctttatttttttatctttttttttttttttgcttttttgggtcaagtgtcgattaccattttgttgttattggattggatct...
species | Glycine max |
transcript | GLYMA15G42460.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TCGGATTGAAGGATCTCATTTTCTTGGAGCATTAAAGCAGAAATTTCTAG CATCCTATTCTGTTTTACCCAAAAAATGTGGAGATTTAAGCCATTCAGTCAEST: gi|213616954|gb|DB959266.1|DB959266
genomic: TCGGATTGAAGGATCTCATTTTCTTGGAGCATTAAAGCAGAAATTTCTAGgtaaggttat ... acatgtgcagCATCCTATTCTGTTTTACCCAAAAAATGTGGAGATTTAAGCCATTCAGTCA
EST: TCGGATTGAAGGATCTCATTTTCTTGGAGCATTAAAGCAGAAATTTCTAG CATCCTATTCTGTTTTACCCAAAAAATGTGGAGATTTAAGCCATTCAGTCAEST: gi|213587384|gb|DB965962.1|DB965962
genomic: TCGGATTGAAGGATCTCATTTTCTTGGAGCATTAAAGCAGAAATTTCTAGgtaaggttat ... acatgtgcagCATCCTATTCTGTTTTACCCAAAAAATGTGGAGATTTAAGCCATTCAGTCA
EST: TCGGATTGAAGGATCTCATTTTCTTGGAGCATTAAAGCAGAAATTTCTAG CATCCTATTCTGTTTTACCCAAAAAATGTGGAGATTTAAGCCATTCAGTCAEST: gi|209710150|gb|BW658899.1|BW658899
genomic: TCGGATTGAAGGATCTCATTTTCTTGGAGCATTAAAGCAGAAATTTCTAGgtaaggttat ... acatgtgcagCATCCTATTCTGTTTTACCCAAAAAATGTGGAGATTTAAGCCATTCAGTCA
EST: TCGGATTGAAGGATCTCATTTTCTTGGAGCATTAAAGCAGAAATTTCTAG CATCCTATTCTGTTTTACCCAAAAAATGTGGAGATTTAAGCCATTCAGTCA
genomic: TCGGATTGAAGGATCTCATTTTCTTGGAGCATTAAAGCAGAAATTTCTAGgtaaggttat ... acatgtgcagCATCCTATTCTGTTTTACCCAAAAAATGTGGAGATTTAAGCCATTCAGTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATCGAGGGCGTGGTCTGTTTGATTTGAACTGAATTTCGGATTGAAGGATCTCATTTTCTTGGAGCATTAAAGCAGAAATTTCTAGgtaaggttattgattgtgctttatttttttatctttttttttttttttgcttttttgggtcaagtgtcgattaccattttgttgttattggattggatct
- - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA