1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TATTTTGAGTCCTAATGAAACTGAACTTGCTCGCCTTACCGGAAGGCCAACAGGAAGTTTTGAAGAGATTGCACAGGCTGCTTTGAAATGCCATGAACTGgtgagttcaagtagtgactttagggttcacaatgaaatgcttctccacattatgctagttgaatgccatattcgttgcttatggatagacaaggttttag...
species | Glycine max |
transcript | GLYMA15G38510.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CAGGAAGTTTTGAAGAGATTGCACAGGCTGCTTTGAAATGCCATGAACTG GGAGTTAAACAAGTTCTTGTGAAACTTGGGGAAAAAGGATCCGCGCTTTTTEST: gi|207826477|gb|GD798188.1|GD798188
genomic: CAGGAAGTTTTGAAGAGATTGCACAGGCTGCTTTGAAATGCCATGAACTGgtgagttcaa ... gaaatttcagGGAGTTAAACAAGTTCTTGTGAAACTTGGGGAAAAAGGATCCGCGCTTTTT
EST: CAGGAAGTTTTGAAGAGATTGCACAGGCTGCTTTGAAATGCCATGAACTG GGAGTTAAACAAGTTCTTGTGAAACTEST: gi|57574195|gb|CX547170.1|CX547170
genomic: CAGGAAGTTTTGAAGAGATTGCACAGGCTGCTTTGAAATGCCATGAACTGgtgagttcaa ... gaaatttcagGGAGTTAAACAAGTTCTTGTGAAACT
EST: CAGGAAGTTTTGAAGAGATTGCACAGGCTGCTTTGAAATGCCATGAACTG GGAGTTAAACAAGTTCTTGTGAAACTTGGGGAAAAAGGATCCGCGCTTTTTEST: gi|208160642|gb|GD958812.1|GD958812
genomic: CAGGAAGTTTTGAAGAGATTGCACAGGCTGCTTTGAAATGCCATGAACTGgtgagttcaa ... gaaatttcagGGAGTTAAACAAGTTCTTGTGAAACTTGGGGAAAAAGGATCCGCGCTTTTT
EST: TTTTGGAGAGATTGCACAGGCTGCTTTGAAATGCCATGAACTG GGAGTTAAACAAGTTCTTGTGAAACTTGGGGAAAAAGGATCCGCGCTTTTTEST: gi|207812827|gb|GD784145.1|GD784145
genomic: TTTTGAAGAGATTGCACAGGCTGCTTTGAAATGCCATGAACTGgtgagttcaa ... gaaatttcagGGAGTTAAACAAGTTCTTGTGAAACTTGGGGAAAAAGGATCCGCGCTTTTT
EST: CAGGAAGTTTTGAAGAGATTGCACAGGCTGCTTTGAAATGCCATGAACTG GGAGTTAAACAAGTTCTTGTGAAACTTGG
genomic: CAGGAAGTTTTGAAGAGATTGCACAGGCTGCTTTGAAATGCCATGAACTGgtgagttcaa ... gaaatttcagGGAGTTAAACAAGTTCTTGTGAAACTTGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TATTTTGAGTCCTAATGAAACTGAACTTGCTCGCCTTACCGGAAGGCCAACAGGAAGTTTTGAAGAGATTGCACAGGCTGCTTTGAAATGCCATGAACTGgtgagttcaagtagtgactttagggttcacaatgaaatgcttctccacattatgctagttgaatgccatattcgttgcttatggatagacaaggttttag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT