Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|51344617|gb|CO985350.1|CO985350EST: CAAGACTCCAGAGTCTACAAAGAATCCTACAAGGCAGTGTTGCAGTACAA GTGAATAGTGGAGTCTTGAGTGTCTGCACTGCCTTCTTGTCCGGGGAGCCT
genomic: CAAGACTCCAGAGTCTACAAAGAATCCTACAAGGCAGTGTTGCAGTACAAgtatgtttta ... ctttgtgcagGTGAATAGTGGAGTCTTGAGTGTCTGCACTGCCTTCTTGTCCGGGGAGCCT
EST:
gi|26048123|gb|CA784709.1|CA784709EST: CAAGACTCCAGAGTCTACAAAGAATCCTACAAGGCAGTGTTGCAGTACAA GTGAATAGTGGAGTCTTGAGTGTCTGCACTGCCTTCTTGTCCGGGGAGCCT
genomic: CAAGACTCCAGAGTCTACAAAGAATCCTACAAGGCAGTGTTGCAGTACAAgtatgtttta ... ctttgtgcagGTGAATAGTGGAGTCTTGAGTGTCTGCACTGCCTTCTTGTCCGGGGAGCCT
EST:
gi|193325046|gb|FK289238.1|FK289238EST: CTACAAAGAATCCTACAAGGCAGTGTTGCAGTACAA GTGAATAGTGGAGTCTTGAGTGTCTGCACTGCCTTCTTGTCCGGGGAGCCT
genomic: CTACAAAGAATCCTACAAGGCAGTGTTGCAGTACAAgtatgtttta ... ctttgtgcagGTGAATAGTGGAGTCTTGAGTGTCTGCACTGCCTTCTTGTCCGGGGAGCCT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CTTAAGAAATGAGCTTGAAGAGCCTCGAAGTTCAGAGGGGGATCAACTTCCAAGACTCCAGAGTCTACAAAGAATCCTACAAGGCAGTGTTGCAGTACAAgtatgttttactgttggttcttattacattatgcattttttaattgtggttacaagttgtgttctgaaaactagaccaggtctgcccgtctgactggaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA