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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGGTTTACAACTCCTTACTGCTAACACCGGGAGTGACCAATCTACCGTGGATGACGGGGTTTCATCTGATGCAGAAAATAAGCGAGCCAAAACCACTGAGgtacataatatttaatttaattttgtggtgattttaattaatttttacaaatctataagttttaattactaaaattgtgaattaatatatgtatacttgtttattcag

Basic information

species Glycine max
transcript GLYMA15G11680.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254334382|gb|GR844167.1|GR844167
EST:     GACGGGGTTTCATCTGATGCAGAAAATAAGCGAGCCAAAACCACTGAG                         CTTGCACAGTTGCAGGTGGAGCTTCAACGCATGAACTCTGAGAACAAGAAG
genomic: GACGGGGTTTCATCTGATGCAGAAAATAAGCGAGCCAAAACCACTGAGgtacataata ... gtttattcagCTTGCACAGTTGCAGGTGGAGCTTCAACGCATGAACTCTGAGAACAAGAAG
EST: gi|254346516|gb|GR856238.1|GR856238
EST:     ATGACGGGGTTTCATCTGATGCAGAAAATAAGCGAGCCAAAACCACTGAG                         CTTGCACAGTTGCAGGTGGAGCTTCAACGCATGAACTCTGAGAACAAGAAG
genomic: ATGACGGGGTTTCATCTGATGCAGAAAATAAGCGAGCCAAAACCACTGAGgtacataata ... gtttattcagCTTGCACAGTTGCAGGTGGAGCTTCAACGCATGAACTCTGAGAACAAGAAG
EST: gi|254327037|gb|GR836646.1|GR836646
EST:     ATGACGGGGTTTCATCTGATGCAGAAAATAAGCGAGCCAAAACCACTGAG                         CTTGCACAGTTGCAGGTGGAGCTTCAACGCATGAACTCTGAGAACAAGAAG
genomic: ATGACGGGGTTTCATCTGATGCAGAAAATAAGCGAGCCAAAACCACTGAGgtacataata ... gtttattcagCTTGCACAGTTGCAGGTGGAGCTTCAACGCATGAACTCTGAGAACAAGAAG