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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAACCAGCTGTAAGGGGAAAAACATCAAGCCAATCAAGTTATAGCGGGGGTGCATTTTACACTACAgtgagtttgttaattaagcccgagtaaatcatattattttgtgagcattacttttatttttaatgattctaaaggtcatgaccatagcccagaagtgctt...

Basic information

species Glycine max
transcript GLYMA15G07480.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298183413|gb|HO028626.1|HO028626
EST:     GAAAAACATCAAGCCAATCAAGTTATAGCGGGGGTGCATTTTACACTACA                         AATCCTGGAAGTGTTGCCCCTGCCACAAATTCAAGGCTATCTCCTCTTAAT
genomic: GAAAAACATCAAGCCAATCAAGTTATAGCGGGGGTGCATTTTACACTACAgtgagtttgt ... aagttttcagAATCCTGGAAGTGTTGCCCCTGCCACAAATTCAAGGCTATCTCCTCTTAAT
EST: gi|16346749|gb|BI972344.1|BI972344
EST:     GAAAAACATCAAGCCAATCAAGTTATAGCGGGGGTGCATTTTACACTACA                         AATCCTGGAAGTGTTGCCCCTGCCACAAATTCAAGGCTATCTCCTCTTAAT
genomic: GAAAAACATCAAGCCAATCAAGTTATAGCGGGGGTGCATTTTACACTACAgtgagtttgt ... aagttttcagAATCCTGGAAGTGTTGCCCCTGCCACAAATTCAAGGCTATCTCCTCTTAAT
EST: gi|16346347|gb|BI971942.1|BI971942
EST:     GAAAAACATCAAGCCAATCAAGTTATAGCGGGGGTGCATTTTACACTACA                         AATCCTGGAAGTGTTGCCCCTGCCACAAATTCAAGGCTATCTCCTCTTAAT
genomic: GAAAAACATCAAGCCAATCAAGTTATAGCGGGGGTGCATTTTACACTACAgtgagtttgt ... aagttttcagAATCCTGGAAGTGTTGCCCCTGCCACAAATTCAAGGCTATCTCCTCTTAAT
EST: gi|38192157|gb|CF921363.1|CF921363
EST:     GAAAAACATCAAGCCAATCAAGTTATAGCGGGGGTGCATTTTACACTACA                         AATCCTGGAAGTGTTGCCCCTGCCACAAATTCAAGGCTATCTCCTCTTAAT
genomic: GAAAAACATCAAGCCAATCAAGTTATAGCGGGGGTGCATTTTACACTACAgtgagtttgt ... aagttttcagAATCCTGGAAGTGTTGCCCCTGCCACAAATTCAAGGCTATCTCCTCTTAAT
EST: gi|254315478|gb|GR825287.1|GR825287
EST:     GAAAAACATCAAGCCAATCAAGTTATAGCGGGGGTGCATTTTACACTACA                         AATCCTGGAAGTGTTGCCCCTGCCACAAATTCAAGGCTATCTCCTCTTAAT
genomic: GAAAAACATCAAGCCAATCAAGTTATAGCGGGGGTGCATTTTACACTACAgtgagtttgt ... aagttttcagAATCCTGGAAGTGTTGCCCCTGCCACAAATTCAAGGCTATCTCCTCTTAAT