1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TGAGGCAGTTACTCCAATAAAGGAGCCCCTCAAAACTAACCTACTCGATGGAAAATGGGAGCTTATATACACTACCTCGCAGTCAATCTTGCAAACCAAGgtaaacaattcttttccccttactgtagttcatcacatttatattttatattcagctaataaaccatccaaggactaagatatgtttagttagatattat...
species | Glycine max |
transcript | GLYMA15G05210.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GAAAATGGGAGCTTATATACACTACCTCGCAGTCAATCTTGCAAACCAAG AGACCAAAGTTGTTGAGATCAGTTGCAAATTATCAAGCAATCAATGTCGATEST: gi|13787532|gb|BG650124.1|BG650124
genomic: GAAAATGGGAGCTTATATACACTACCTCGCAGTCAATCTTGCAAACCAAGgtaaacaatt ... gcaatgacagAGACCAAAGTTGTTGAGATCAGTTGCAAATTATCAAGCAATCAATGTCGAT
EST: GAAAATGGGAGCTTATATACACTACCTCGCAGTCAATCTTGCAAACCAAG AGACCAAAGTTGTTGAGATCAGTTGCAAATTATCAAGCAATCAATGTCGATEST: gi|31462753|gb|CD404781.1|CD404781
genomic: GAAAATGGGAGCTTATATACACTACCTCGCAGTCAATCTTGCAAACCAAGgtaaacaatt ... gcaatgacagAGACCAAAGTTGTTGAGATCAGTTGCAAATTATCAAGCAATCAATGTCGAT
EST: GAAAATGGGAGCTCATATACACTACCTCGCAGTCAATCTTGCAAACCAAG AGACCAAAGTTGTTGAGATCAGTTGCAAATTATCAAGCAATCAATGTCGATEST: gi|31458564|gb|CD400592.1|CD400592
genomic: GAAAATGGGAGCTTATATACACTACCTCGCAGTCAATCTTGCAAACCAAGgtaaacaatt ... gcaatgacagAGACCAAAGTTGTTGAGATCAGTTGCAAATTATCAAGCAATCAATGTCGAT
EST: GAAAATGGGAGCTTATATACACTACCTCGCAGTCAATCTTGCAAACCAAG AGACCAAAGTTGTTGAGATCAGTTGCAAATTATCAAGCAATCAATGTCGATEST: gi|31458909|gb|CD400937.1|CD400937
genomic: GAAAATGGGAGCTTATATACACTACCTCGCAGTCAATCTTGCAAACCAAGgtaaacaatt ... gcaatgacagAGACCAAAGTTGTTGAGATCAGTTGCAAATTATCAAGCAATCAATGTCGAT
EST: AGTCAATCTTGCAAACCAAG AGACCAAAGTTGTTGAGATCAGTTGCAAATTATCAAGCAATCAATGTCGATEST: gi|17153711|gb|BM143644.1|BM143644
genomic: AGTCAATCTTGCAAACCAAGgtaaacaatt ... gcaatgacagAGACCAAAGTTGTTGAGATCAGTTGCAAATTATCAAGCAATCAATGTCGAT
EST: GAAAATGGGAGCTCATATACACTACCTCGCAGTCAATCTTGCAAACCAAG AGACCAAAGTTGTTGAGATCAGTTGCAAATTATCAAGCAATCAATGTCGATEST: gi|213593886|gb|DB961886.1|DB961886
genomic: GAAAATGGGAGCTTATATACACTACCTCGCAGTCAATCTTGCAAACCAAGgtaaacaatt ... gcaatgacagAGACCAAAGTTGTTGAGATCAGTTGCAAATTATCAAGCAATCAATGTCGAT
EST: GAAAATGGGAGCTTATATACACTACCTCGCAGTCAATCTTGCAAACCAAG AGACCAAAGTTGTTGAGATCAGTTGCAAATTATCAAGCAATCAATGTCGAT
genomic: GAAAATGGGAGCTTATATACACTACCTCGCAGTCAATCTTGCAAACCAAGgtaaacaatt ... gcaatgacagAGACCAAAGTTGTTGAGATCAGTTGCAAATTATCAAGCAATCAATGTCGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGAGGCAGTTACTCCAATAAAGGAGCCCCTCAAAACTAACCTACTCGATGGAAAATGGGAGCTTATATACACTACCTCGCAGTCAATCTTGCAAACCAAGgtaaacaattcttttccccttactgtagttcatcacatttatattttatattcagctaataaaccatccaaggactaagatatgtttagttagatattat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tttcccc