1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GTATTCCCAATGCACTTAACGTGATATCCAATTTCCCTTTTCTGGTTATTGGCCTCGTTGGACTTGTACTCTGTCATCATGGAAATTACTTTAGGCTCAGgtactgtactcactgcttgcaaaaaccatgatcctattttttatttattttttgttaatataaag
species | Glycine max |
transcript | GLYMA15G05100.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GGCCTCGTTGGACTTGTACTCTGTCATCATGGAAATTACTTTAGGCTCAG CTTGCAAGGTGAACTATGGGGCTGGACATGCTTCTATGTTGGCGTGGCTGCEST: gi|18734259|gb|BM528080.1|BM528080
genomic: GGCCTCGTTGGACTTGTACTCTGTCATCATGGAAATTACTTTAGGCTCAGgtactgtact ... taatataaagCTTGCAAGGTGAACTATGGGGCTGGACATGCTTCTATGTTGGCGTGGCTGC
EST: GGCCTCGTTGGACTTGTACTCTGTCATCATGGAAATTACTTTAGGCTCAG CTTGCAAGGTGAACTATGGGGCTGGACATGCTTCTATGTTGGCGTGGCTGCEST: gi|26045603|gb|CA783140.1|CA783140
genomic: GGCCTCGTTGGACTTGTACTCTGTCATCATGGAAATTACTTTAGGCTCAGgtactgtact ... taatataaagCTTGCAAGGTGAACTATGGGGCTGGACATGCTTCTATGTTGGCGTGGCTGC
EST: GGCCTCGTTGGACTTGTACTCTGTCATCATGGAAATTACTTTAGGCTCAG CTTGCAAGGTGAACTATGGGGCTGGACATGCTTCTATGTTGGCGTGGCTGCEST: gi|298193280|gb|HO033714.1|HO033714
genomic: GGCCTCGTTGGACTTGTACTCTGTCATCATGGAAATTACTTTAGGCTCAGgtactgtact ... taatataaagCTTGCAAGGTGAACTATGGGGCTGGACATGCTTCTATGTTGGCGTGGCTGC
EST: GGCCTCGTTGGACTTGTACTCTGTCATCATGGAAATTACTTTAGGCTCAG CTTGCAAGGTGAACTATGGGGCTGGCCATGCTTCTATGTTGGCGTGGCTGCEST: gi|24206065|gb|BU965318.1|BU965318
genomic: GGCCTCGTTGGACTTGTACTCTGTCATCATGGAAATTACTTTAGGCTCAGgtactgtact ... taatataaagCTTGCAAGGTGAACTATGGGGCTGGACATGCTTCTATGTTGGCGTGGCTGC
EST: GGCCTCGTTGGACTTGTACTCTGTCATCATGGAAATTACTTTAGGCTCAG CTTGCAAGGTGAACTATGGGGCTGGACATGCTTCTATGTTGGCGTGGCTGCEST: gi|9898820|gb|BE607788.1|BE607788
genomic: GGCCTCGTTGGACTTGTACTCTGTCATCATGGAAATTACTTTAGGCTCAGgtactgtact ... taatataaagCTTGCAAGGTGAACTATGGGGCTGGACATGCTTCTATGTTGGCGTGGCTGC
EST: GGCCTCGTTGGACTTGTACTCTGTCATCATGGAAATTACTTTAGGCTCAG CTTGCAAGGTGAACTATGGGGCTGGACATGCTTCTATGTTGGCGTGGCTGCEST: gi|298199382|gb|HO042745.1|HO042745
genomic: GGCCTCGTTGGACTTGTACTCTGTCATCATGGAAATTACTTTAGGCTCAGgtactgtact ... taatataaagCTTGCAAGGTGAACTATGGGGCTGGACATGCTTCTATGTTGGCGTGGCTGC
EST: GGCCTCGTTGGACTTGTACTCTGTCATCATGGAAATTACTTTAGGCTCAG CTTGCAAGGTGAACTATGGGGCTGGACATGCTTCTATGTTGGCGTGGCTGC
genomic: GGCCTCGTTGGACTTGTACTCTGTCATCATGGAAATTACTTTAGGCTCAGgtactgtact ... taatataaagCTTGCAAGGTGAACTATGGGGCTGGACATGCTTCTATGTTGGCGTGGCTGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTATTCCCAATGCACTTAACGTGATATCCAATTTCCCTTTTCTGGTTATTGGCCTCGTTGGACTTGTACTCTGTCATCATGGAAATTACTTTAGGCTCAGgtactgtactcactgcttgcaaaaaccatgatcctattttttatttattttttgttaatataaag
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