1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TTCTACTCCGTTGAAAACGCTGCGTGGAGCTAGCCGCTCGCTGAGAGTGGCTCAATTTTGCAGTGTTGCCAATATGTCTTCCTCATTGCAGATTGAATTGgtgagagcgggtctcttattagttttcagttgctgtggtcctgttggattataaataggtcacccgtgctgataagttttctgaagaaatatgctgaaagcctaaattgtgacttattgtctttaaaaaaaaatattgttag
species | Glycine max |
transcript | GLYMA15G03320.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CTCAATTTTGCAGTGTTGCCAATATGTCTTCCTCATTGCAGATTGAATTG GTACCTTGCCTGAAGGACAATTATGCATATCTGTTACATGATGTAGATACGEST: gi|298180920|gb|HO022359.1|HO022359
genomic: CTCAATTTTGCAGTGTTGCCAATATGTCTTCCTCATTGCAGATTGAATTGgtgagagcgg ... atattgttagGTACCTTGCCTGAAGGACAATTATGCATATCTGTTACATGATGTAGATACG
EST: CTCAATTTTGCAGTGTTGCCAATATGTCTTCCTCATTGCAGATTGAATTG GTACCTTGCCTGAAGGACAATTATGCATATCTGTTACATGATGTAGATACGEST: gi|23731943|gb|BU764121.1|BU764121
genomic: CTCAATTTTGCAGTGTTGCCAATATGTCTTCCTCATTGCAGATTGAATTGgtgagagcgg ... atattgttagGTACCTTGCCTGAAGGACAATTATGCATATCTGTTACATGATGTAGATACG
EST: CTCAATTTTGCAGTGTTGCCAATATGTCTTCCTCATTGCAGATTGAATTG GTACCTTGCCTGAAGGACAATTATGCATATCTGTTACATGATGTAGATACG
genomic: CTCAATTTTGCAGTGTTGCCAATATGTCTTCCTCATTGCAGATTGAATTGgtgagagcgg ... atattgttagGTACCTTGCCTGAAGGACAATTATGCATATCTGTTACATGATGTAGATACG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTCTACTCCGTTGAAAACGCTGCGTGGAGCTAGCCGCTCGCTGAGAGTGGCTCAATTTTGCAGTGTTGCCAATATGTCTTCCTCATTGCAGATTGAATTGgtgagagcgggtctcttattagttttcagttgctgtggtcctgttggattataaataggtcacccgtgctgataagttttctgaagaaatatgctgaaagcctaaattgtgacttattgtctttaaaaaaaaatattgttag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT