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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGAAGATTGGACGCCCTGGGTATCGTGTGACCAAGCAGTATGACCCGGAGACAAAACAAAGATCTCTCCTATTCCAGgttctttttcacgcaattttcatacttttcttttatcatattttatgtactttttttataattgtgtattgtttgatgtag

Basic information

species Glycine max
transcript GLYMA15G00840.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|207805172|gb|GD779801.1|GD779801
EST:     TGACCAAGCAGTATGACCCGGAGACAAAACAAAGATCTCTCCTATTCCAG                         ATTGAATATCCGGAGATTGAAGACCTCATGAAGCCGAGGCACCGGTTTATG
genomic: TGACCAAGCAGTATGACCCGGAGACAAAACAAAGATCTCTCCTATTCCAGgttctttttc ... tttgatgtagATTGAATATCCGGAGATTGAAGACCTCATGAAGCCGAGGCACCGGTTTATG
EST: gi|298167794|gb|HO013057.1|HO013057
EST:     TGACCAAGCAGTATGACCCGGAGACAAAACAAAGATCTCTCCTATTCCAG                         ATTGAATATCCGGAGATTGAAGACCTCATGAAGCCGAGGCACCGGTTTATG
genomic: TGACCAAGCAGTATGACCCGGAGACAAAACAAAGATCTCTCCTATTCCAGgttctttttc ... tttgatgtagATTGAATATCCGGAGATTGAAGACCTCATGAAGCCGAGGCACCGGTTTATG
EST: gi|209700591|gb|BW670322.1|BW670322
EST:     TGACCAAGCAGTATGACCCGGAGACAAAACAAAGATCTCTCCTATTCCAG                         ATTGAATATCCGGAGATTGAAGACCTCATGAAGCCGAGGCACCGGTTTATG
genomic: TGACCAAGCAGTATGACCCGGAGACAAAACAAAGATCTCTCCTATTCCAGgttctttttc ... tttgatgtagATTGAATATCCGGAGATTGAAGACCTCATGAAGCCGAGGCACCGGTTTATG