1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TCTGTCTTATGACCCTAACCTGAGGCTTCCGTTATGGCCTTCTGCGGATAGTGCAAGAGAAGGGATTCTGAGTATATGGGAGACTGCAGATATCATTAAGgttcctctcctatcaatagggccgaatgtatattctttagcaatagactttttcttgttccctttttcaagagtacagattacaagggaatggaaaaaaacagacaacaataccatctctaacaaccaatctgataattattcag
species | Glycine max |
transcript | GLYMA14G39670.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GTGCAAGAGAAGGGATTCTGAGTATATGGGAGACTGCAGATATCATTAAG ATAAGTGAAGACGAGATTTCTTTTCTTACAAAAGGTGAGGACCCATATGATEST: gi|58016522|gb|CX703264.1|CX703264
genomic: GTGCAAGAGAAGGGATTCTGAGTATATGGGAGACTGCAGATATCATTAAGgttcctctcc ... aattattcagATAAGTGAAGACGAGATTTCTTTTCTTACAAAAGGTGAGGACCCATATGAT
EST: GTGCAAGAGAAGGGATTCTGAGTATATGGGAGACTGCAGATATCATTAAG ATAAGTGAAGACGAGATTTCTTTTCTTACAAAAGGTGAGGACCCATATGAT
genomic: GTGCAAGAGAAGGGATTCTGAGTATATGGGAGACTGCAGATATCATTAAGgttcctctcc ... aattattcagATAAGTGAAGACGAGATTTCTTTTCTTACAAAAGGTGAGGACCCATATGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCTGTCTTATGACCCTAACCTGAGGCTTCCGTTATGGCCTTCTGCGGATAGTGCAAGAGAAGGGATTCTGAGTATATGGGAGACTGCAGATATCATTAAGgttcctctcctatcaatagggccgaatgtatattctttagcaatagactttttcttgttccctttttcaagagtacagattacaagggaatggaaaaaaacagacaacaataccatctctaacaaccaatctgataattattcag
- - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT