Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   		11  
 5'  3'   		12  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATTCCATTTTCATCTATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAGgtctttcatcaaacattttggcttatatatatagagtttttatacaccctttctttggttcatttaacaccttctaatgttttattctttataacccttcatttggttagttgacttcatatgttttgatttctatag

Basic information

species Glycine max
transcript GLYMA14G00760.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|16349042|gb|BI974637.1|BI974637
EST:     ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAG                         ATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
genomic: ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAGgtctttcatc ... atttctatagATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
EST: gi|7478350|gb|AW666230.1|AW666230
EST:     ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAG                         ATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
genomic: ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAGgtctttcatc ... atttctatagATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
EST: gi|9986217|gb|BE660325.1|BE660325
EST:     ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAG                         ATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
genomic: ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAGgtctttcatc ... atttctatagATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
EST: gi|209700566|gb|BW670310.1|BW670310
EST:     ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAG                         ATGTTTGCATTGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
genomic: ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAGgtctttcatc ... atttctatagATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
EST: gi|19269211|gb|BM885467.1|BM885467
EST:     ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAG                         ATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
genomic: ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAGgtctttcatc ... atttctatagATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
EST: gi|16348094|gb|BI973689.1|BI973689
EST:     ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAG                         ATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
genomic: ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAGgtctttcatc ... atttctatagATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
EST: gi|19935544|gb|BQ080482.1|BQ080482
EST:     ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAG                         ATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
genomic: ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAGgtctttcatc ... atttctatagATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
EST: gi|120491397|gb|EH219564.1|EH219564
EST:     ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAG                         ATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
genomic: ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAGgtctttcatc ... atttctatagATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
EST: gi|192312109|gb|FK003872.1|FK003872
EST:     ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAG                         ATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
genomic: ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAGgtctttcatc ... atttctatagATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
EST: gi|37993878|gb|CF805624.1|CF805624
EST:     CAGCATCTTCAGATTCAATCAAGCCAAGAG                         ATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
genomic: CAGCATCTTCAGATTCAATCAAGCCAAGAGgtctttcatc ... atttctatagATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
EST: gi|7926100|gb|AW832126.1|AW832126
EST:     TCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAG                         ATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
genomic: TCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAGgtctttcatc ... atttctatagATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
EST: gi|192317815|gb|FK009407.1|FK009407
EST:     ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAG                         ATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
genomic: ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAGgtctttcatc ... atttctatagATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
EST: gi|192312110|gb|FK003873.1|FK003873
EST:     ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAG                         ATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
genomic: ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAGgtctttcatc ... atttctatagATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
EST: gi|7233754|gb|AW569097.1|AW569097
EST:     ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAG                         ATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
genomic: ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAGgtctttcatc ... atttctatagATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
EST: gi|13481409|gb|BG510752.1|BG510752
EST:     ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAG                         ATGTTTGCATTGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
genomic: ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAGgtctttcatc ... atttctatagATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
EST: gi|192302972|gb|FG996988.1|FG996988
EST:     ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAG                         ATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
genomic: ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAGgtctttcatc ... atttctatagATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
EST: gi|19345910|gb|BM890790.1|BM890790
EST:     ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAG                         ATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
genomic: ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAGgtctttcatc ... atttctatagATGTTTGCATCGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA