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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGAAGATTGGACGACCTGGGTACCGTGTCACCAAGCAGTATGACCCGGAGACTAAACAAAGATCTCTCCTATTCCAGgttctttctcttcttcttctttttttatctttatttacgcatattatgataatttcaatatatatatacttttaattgtgtattgatgtag

Basic information

species Glycine max
transcript GLYMA13G44430.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|213591623|gb|DB968147.1|DB968147
EST:     TCACCAAGCAGTATGACCCGGAGACTAAACAAAGATCTCTCCTATTCCAG                         ATTGAATATCCGGAGATTGAAGACCTCACGAAGCCGAGGCACCGGTTTATG
genomic: TCACCAAGCAGTATGACCCGGAGACTAAACAAAGATCTCTCCTATTCCAGgttctttctc ... attgatgtagATTGAATATCCGGAGATTGAAGACCTCACGAAGCCGAGGCACCGGTTTATG
EST: gi|213611389|gb|DB972762.1|DB972762
EST:     TCACCAAGCAGTATGACCCGGAGACTAAACAAAGATCTCTCCTATTCCAG                         ATTGAATATCCGGAGATTGAAGACCTCACGAAGCCGAGGCACCGGTTTATG
genomic: TCACCAAGCAGTATGACCCGGAGACTAAACAAAGATCTCTCCTATTCCAGgttctttctc ... attgatgtagATTGAATATCCGGAGATTGAAGACCTCACGAAGCCGAGGCACCGGTTTATG
EST: gi|24205772|gb|BU965025.1|BU965025
EST:     TCACCAAGCAGTATGACCCGGAGACTAAACAAAGATCTCTCCTATTCCAG                         ATTGAATATCCGGAGATTGAAGACCTCACGAAGCCGAGGCACCGGTTTATG
genomic: TCACCAAGCAGTATGACCCGGAGACTAAACAAAGATCTCTCCTATTCCAGgttctttctc ... attgatgtagATTGAATATCCGGAGATTGAAGACCTCACGAAGCCGAGGCACCGGTTTATG
EST: gi|19270221|gb|BM886477.1|BM886477
EST:     TCACCAAGCAGTATGACCCGGAGACTAAACAAAGATCTCTCCTATTCCAG                         ATTGAATATCCGGAGATTGAAGACCTCACGAAGCCGAGGCACCGGTTTATG
genomic: TCACCAAGCAGTATGACCCGGAGACTAAACAAAGATCTCTCCTATTCCAGgttctttctc ... attgatgtagATTGAATATCCGGAGATTGAAGACCTCACGAAGCCGAGGCACCGGTTTATG
EST: gi|213611714|gb|DB960642.1|DB960642
EST:     TCACCAAGCAGTATGACCCGGAGACTAAACAAAGATCTCTCCTATTCCAG                         ATTGAATATCCGGAGATTGAAGACCTCACGAAGCCGAGGCACCGGTTTATG
genomic: TCACCAAGCAGTATGACCCGGAGACTAAACAAAGATCTCTCCTATTCCAGgttctttctc ... attgatgtagATTGAATATCCGGAGATTGAAGACCTCACGAAGCCGAGGCACCGGTTTATG
EST: gi|6069618|gb|AW099277.1|AW099277
EST:     TCACCAAGCAGTATGACCCGGAGACTAAACAAAGATCTCTCCTATTCCAG                         ATTGAATATCCGGAGATTGAAGACCTCACGAAGCCGAGGCACCGGTTTATG
genomic: TCACCAAGCAGTATGACCCGGAGACTAAACAAAGATCTCTCCTATTCCAGgttctttctc ... attgatgtagATTGAATATCCGGAGATTGAAGACCTCACGAAGCCGAGGCACCGGTTTATG
EST: gi|213595326|gb|DB966506.1|DB966506
EST:     TCACCAAGCAGTATGACCCGGAGACTAAACAAAGATCTCTCCTATTCCAG                         ATTGAATATCCGGAGATTGAAGACCTCACGAAGCCGAGGCACCGGTTTATG
genomic: TCACCAAGCAGTATGACCCGGAGACTAAACAAAGATCTCTCCTATTCCAGgttctttctc ... attgatgtagATTGAATATCCGGAGATTGAAGACCTCACGAAGCCGAGGCACCGGTTTATG