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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGCCCGTGCGAGATCTGCGATCTGCGGATTCCAATTCCAACAGTCACAGCAAGTATGATAAGGACAAAGGTGTCAATGTGCAGGTCCTCGTGAGGTGCAGgtgagtttgactcgctctaactcgtcgctgactcggtcattgaggtttgttttaatgtttcactgctccgaaactgaaaatgaaaaataaaaaataaaaaattggtgtcgtatttgcag

Basic information

species Glycine max
transcript GLYMA13G40580.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|213594490|gb|DB968018.1|DB968018
EST:     AAGTATGATAAGGACAAAGGTGTCAATGTGCAGGTCCTCGTGAGGTGCAG                         GCCGTTGAGTGAAGATGAAACGAGGCTGCACACGCCGGTTGTGATTTCGTG
genomic: AAGTATGATAAGGACAAAGGTGTCAATGTGCAGGTCCTCGTGAGGTGCAGgtgagtttga ... gtatttgcagGCCGTTGAGTGAAGATGAAACGAGGCTGCACACGCCGGTTGTGATTTCGTG
EST: gi|208204296|gb|GE002355.1|GE002355
EST:     AAGTATGATAAGGACAAAGGTGTCAATGTGCAGGTCCTCGTGAGGTGCAG                         GCCGTTGAGTGAAGATGAAACGAGGCTGCACACGCCGGTTGTGATTTCGTG
genomic: AAGTATGATAAGGACAAAGGTGTCAATGTGCAGGTCCTCGTGAGGTGCAGgtgagtttga ... gtatttgcagGCCGTTGAGTGAAGATGAAACGAGGCTGCACACGCCGGTTGTGATTTCGTG