Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTGTAAGGTCTGGACGAAATGGCATGTCCTTCTGGCTTGATGGCTTCAAGAAGAGTAGTAACATGGTGTCAGCATCTGGAATACCAGAATATTCATACAAgtatgtttgtcttatagtgaattaacttcatgtgctaccattcttcttgttctgatatgacccttctctatgttcttgcacatgtgctgagactatatga...

Basic information

species Glycine max
transcript GLYMA13G36140.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|213607234|gb|DB965120.1|DB965120
EST:     AAGAGTAGTAACATGGTGTCAGCATCTGGAATACCAGAATATTCATACAA                         GGATTTGCAAAAGGCAACATATAATTTTACAACACTCATAGGGCAAGGTGC
genomic: AAGAGTAGTAACATGGTGTCAGCATCTGGAATACCAGAATATTCATACAAgtatgtttgt ... tgtgcttcagGGATTTGCAAAAGGCAACATATAATTTTACAACACTCATAGGGCAAGGTGC
EST: gi|15813093|gb|BI785368.1|BI785368
EST:     AAGAGTAGTAACATGGTGTCAGCATCTGGAATACCAGAATATTCATACAA                         GGATTTGCAAAAGGCAACATATAATTTTACAACACTCATAGGGCAAGGTGC
genomic: AAGAGTAGTAACATGGTGTCAGCATCTGGAATACCAGAATATTCATACAAgtatgtttgt ... tgtgcttcagGGATTTGCAAAAGGCAACATATAATTTTACAACACTCATAGGGCAAGGTGC
EST: gi|209713130|gb|BW653839.1|BW653839
EST:     AAGAGTAGTAACATGGTGTCAGCATCTGGAATACCAGAATATTCATACAA                         GGATTTGCCAAAGGCAACATATAATTTTACAACACTC
genomic: AAGAGTAGTAACATGGTGTCAGCATCTGGAATACCAGAATATTCATACAAgtatgtttgt ... tgtgcttcagGGATTTGCAAAAGGCAACATATAATTTTACAACACTC