Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|207771270|gb|GD746385.1|GD746385EST: TTTGAGTACAAAGCTGCCACTGGGGCTCTCACGCCTGACCGTGTTGCTGT GTATTGCAAGT
genomic: TTTGAGTACAAAGCTGCCACTGGGGCTTTCACGCCTGACCGTGTTGCTGTgtaagttttt ... tgttttgaagGTATTGCAAGT
EST:
gi|213617855|gb|DB967273.1|DB967273EST: TTTGAGTACAAAGCTGCCACTGGGGCTTTCACGCCTGACCGTGTTGCTGT GTATTGCAAGTGCG
genomic: TTTGAGTACAAAGCTGCCACTGGGGCTTTCACGCCTGACCGTGTTGCTGTgtaagttttt ... tgttttgaagGTATTGCAAGTGCG
EST:
gi|192317077|gb|FK007844.1|FK007844EST: TTTGAGTACAAAGCTGCCACTGGGGCTTTCACGCCTGACCGTGTTGCTGT GTATTGCAAGTGCGAGATGCCTTATAACCCAGATGACCTCATGGTGCAGTG
genomic: TTTGAGTACAAAGCTGCCACTGGGGCTTTCACGCCTGACCGTGTTGCTGTgtaagttttt ... tgttttgaagGTATTGCAAGTGCGAGATGCCTTATAACCCAGATGACCTCATGGTGCAGTG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AGAATTATACCAAGCTTGAGAATGTAGGTGCTGAGGATTACTATTGTAGGTTTGAGTACAAAGCTGCCACTGGGGCTTTCACGCCTGACCGTGTTGCTGTgtaagtttttttatttctgtttttactgagataatggtgttgtttgtgttttaagtgtttgaaatggtgggttttgttttgttgatttagtttggttttgtgttttgaag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC