1 5' 3' | 2 5' 3' | 3 5' 3' |
CCAGGACCACGTGACGTTCCCCACCAATGTCTTATAAAGCGGAACAAGAAAACTTCAACTTTTTATTTATATCTTGCCCTTACACCATgtaagtaagtattgtattggtaaaaggttttaatttttcttgtctgttctggagatggatgaaaaagaattatggtggagttgaatgctctcctgtgctc...
species | Glycine max |
transcript | GLYMA13G34470.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GCGGAACAAGAAAACTTCAACTTTTTATTTATATCTTGCCCTTACACCAT CATTCACAGATAAAGGGAAGTTTCTGCTAGCAGCTAGGAGATATAGGTGTGEST: gi|15813642|gb|BI785917.1|BI785917
genomic: GCGGAACAAGAAAACTTCAACTTTTTATTTATATCTTGCCCTTACACCATgtaagtaagt ... ccattgccagCATTCACAGATAAAGGGAAGTTTCTGCTAGCAGCTAGGAGATATAGGTGTG
EST: GCGGAACAAGAAAACTTCAACTTTTTATTTATATCTTGCCCTTACACCAT CATTCACAGATAAAGGGAAGTTTCTGCTAGCAGCTANGAGATATAGGEST: gi|27425370|gb|CA936890.1|CA936890
genomic: GCGGAACAAGAAAACTTCAACTTTTTATTTATATCTTGCCCTTACACCATgtaagtaagt ... ccattgccagCATTCACAGATAAAGGGAAGTTTCTGCTAGCAGCTAGGAGATATAGG
EST: GCGGAACAAGAAAACTTCAACTTTTTATTTATATCTTGCCCTTACACCAT CATTCACAGATAAAGGGAAGTTTCTGCTAGCAGCTAGGAGATATAGGTGTGEST: gi|14125194|gb|BG789632.1|BG789632
genomic: GCGGAACAAGAAAACTTCAACTTTTTATTTATATCTTGCCCTTACACCATgtaagtaagt ... ccattgccagCATTCACAGATAAAGGGAAGTTTCTGCTAGCAGCTAGGAGATATAGGTGTG
EST: GCGGAACAAGAAAACTTCAACTTTTTATTTATATCTTGCCCTTACACCAT CATTCACAGATAAAGGGAAGTTTCTGCTAGCAGCTAGGAGATATAGGTGTGEST: gi|19271158|gb|BM887414.1|BM887414
genomic: GCGGAACAAGAAAACTTCAACTTTTTATTTATATCTTGCCCTTACACCATgtaagtaagt ... ccattgccagCATTCACAGATAAAGGGAAGTTTCTGCTAGCAGCTAGGAGATATAGGTGTG
EST: CTTTTTATTTATATCTTGCCCTTACACCAT CATTCACAGATAAAGGGAAGTTTCTGCTAGCAGCTAGGAGATATAGGTGTGEST: gi|16996623|gb|BM085995.1|BM085995
genomic: CTTTTTATTTATATCTTGCCCTTACACCATgtaagtaagt ... ccattgccagCATTCACAGATAAAGGGAAGTTTCTGCTAGCAGCTAGGAGATATAGGTGTG
EST: GCGGAACAAGAAAACTTCAACTTTTTATTTATATCTTGCCCTTACACCAT CATTCACAGATAAAGGGAAGTTTCTGCTAGCAGCTAGGAGATATAGGTGTG
genomic: GCGGAACAAGAAAACTTCAACTTTTTATTTATATCTTGCCCTTACACCATgtaagtaagt ... ccattgccagCATTCACAGATAAAGGGAAGTTTCTGCTAGCAGCTAGGAGATATAGGTGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCAGGACCACGTGACGTTCCCCACCAATGTCTTATAAAGCGGAACAAGAAAACTTCAACTTTTTATTTATATCTTGCCCTTACACCATgtaagtaagtattgtattggtaaaaggttttaatttttcttgtctgttctggagatggatgaaaaagaattatggtggagttgaatgctctcctgtgctc
- - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaaagaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctctcct