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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCGTCGAGGTCGAAGGCCGCATCGTCTCCGAGATCGGCCCCGGCCTTCTCGTCCTCGTCGGAATCCACGACTCTGATTCCGACGCCGACGCCGATTACATgtctttaccccctttcaatccaatttcaacttctcattactcattactcaacttatctttactttattaattaacag

Basic information

species Glycine max
transcript GLYMA13G30670.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298199178|gb|HO042541.1|HO042541
EST:     GTCCTCGTCGGAATCCACGACTCTGATTCCGACGCCGACGCCGATTACAT                         ATGTCGAAAGGTCTTGAATATGAGGCTGTTCCCAAATGAAAATACGGGCAA
genomic: GTCCTCGTCGGAATCCACGACTCTGATTCCGACGCCGACGCCGATTACATgtctttaccc ... taattaacagATGTCGAAAGGTCTTGAATATGAGGCTGTTCCCAAATGAAAATACGGGCAA
EST: gi|193630144|gb|FK585313.1|FK585313
EST:     GTCCTCGTCGGAATCCACGACTCTGATTCCGACGCCGACGCCGATTACAT                         ATGTCGAAAGGTCTTGAATATGAGGCTGTTCCCAAATGAAAATACGGGCAA
genomic: GTCCTCGTCGGAATCCACGACTCTGATTCCGACGCCGACGCCGATTACATgtctttaccc ... taattaacagATGTCGAAAGGTCTTGAATATGAGGCTGTTCCCAAATGAAAATACGGGCAA
EST: gi|193465651|gb|FK433312.1|FK433312
EST:     GTCCTCGTCGGAATCCACGACTCTGATTCCGACGCCGACGCCGATTACAT                         ATGTCGAAAGGTCTTGAATATGAGGCTGTTCCCAAATGAAAATACGGGCAA
genomic: GTCCTCGTCGGAATCCACGACTCTGATTCCGACGCCGACGCCGATTACATgtctttaccc ... taattaacagATGTCGAAAGGTCTTGAATATGAGGCTGTTCCCAAATGAAAATACGGGCAA
EST: gi|298182728|gb|HO031463.1|HO031463
EST:     GTCCTCGTCGGAATCCACGACTCTGATTCCGACGCCGACGCCGATTACAT                         ATGTCGAAAGGTCTTGAATATGAGGCTGTTCCCAAATGAAAATACGGGCAA
genomic: GTCCTCGTCGGAATCCACGACTCTGATTCCGACGCCGACGCCGATTACATgtctttaccc ... taattaacagATGTCGAAAGGTCTTGAATATGAGGCTGTTCCCAAATGAAAATACGGGCAA
EST: gi|298166730|gb|HO010169.1|HO010169
EST:     GTCCTCGTCGGAATCCACGACTCTGATTCCGACGCCGACGCCGATTACAT                         ATGTCGAAAGGTCTTGAATATGAGGCTGTTCCCAAATGAAAATACGGGCAA
genomic: GTCCTCGTCGGAATCCACGACTCTGATTCCGACGCCGACGCCGATTACATgtctttaccc ... taattaacagATGTCGAAAGGTCTTGAATATGAGGCTGTTCCCAAATGAAAATACGGGCAA