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GGCAAGGTGAAAATTGCTGAGCATGTACGGACTGGTCATAAAGTTGCTATAAAGATCCTTAACCGCCACAAGATTAAAAACATGGAAATGGAAGAAAAAGgtctgaatcatttgcatacataattttgactgtttatctaactgcaggatctgattttaattgttttcagttttcctatatttttaagcacaagtatatg...
species | Glycine max |
transcript | GLYMA13G05700.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GATTAAAAACATGGAAATGGAAGAAAAAG TTAGAAGAGAAATCAAAATTTTAAGATTGTTTATGCATCATCACATTATAAEST: gi|193456839|gb|FK422675.1|FK422675
genomic: GATTAAAAACATGGAAATGGAAGAAAAAGgtctgaatca ... tttgttgcagTTAGAAGAGAAATCAAAATTTTAAGATTGTTTATGCATCATCACATTATAA
EST: AAGATCCTTAACCGCCACAAGAATTAAAAACATGGAAATGGAAGAAAAAG TTAGAAGAGAAATCAAAATTTTAAGATTGTTTTATGCEST: gi|209725162|gb|BW659832.1|BW659832
genomic: AAGATCCTTAACCGCCACAAGA-TTAAAAACATGGAAATGGAAGAAAAAGgtctgaatca ... tttgttgcagTTAGAAGAGAAATCAAAATTTTAAGATTGTTT-ATGC
EST: AAAGATCCTTAACCGCCACAAGATTAAAAACATGGAAATGGAAGAAAAAG TTAGAAGAGAAATCAAAATTTTAAGATTGTTTATGCATCATCACATTATAAEST: gi|209717789|gb|BW666062.1|BW666062
genomic: AAAGATCCTTAACCGCCACAAGATTAAAAACATGGAAATGGAAGAAAAAGgtctgaatca ... tttgttgcagTTAGAAGAGAAATCAAAATTTTAAGATTGTTTATGCATCATCACATTATAA
EST: AAAGATCCTTAACCGCCACAAGATTAAAAACATGGAAATGGAAGAAAAAG TTAGAAGAGAAATCAAAATTTTAAGATTGTTTATGCATCATCACATTATAA
genomic: AAAGATCCTTAACCGCCACAAGATTAAAAACATGGAAATGGAAGAAAAAGgtctgaatca ... tttgttgcagTTAGAAGAGAAATCAAAATTTTAAGATTGTTTATGCATCATCACATTATAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGCAAGGTGAAAATTGCTGAGCATGTACGGACTGGTCATAAAGTTGCTATAAAGATCCTTAACCGCCACAAGATTAAAAACATGGAAATGGAAGAAAAAGgtctgaatcatttgcatacataattttgactgtttatctaactgcaggatctgattttaattgttttcagttttcctatatttttaagcacaagtatatg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA