Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGTTGGTTTAAGACCAGATATGCCGTATTTCAGGACAAGTGCCACTCAGAGAGTGCCAAGAATCACGTACCTGCACATATATGAGTGTGAAAAGTTCTCGgtacttactctaaccttgaaactgatttcacggtgcatgcatgcatgagactgagtgctgtttttgttgtgattataaccttgttttattgttgtgttgcacag

Basic information

species Glycine max
transcript GLYMA13G05230.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254349262|gb|GR860060.1|GR860060
EST:     GAGTGCCAAGAATCACGTACCTGCACATATATGAGTGTGAAAAGTTCTCG                         ATGGGGATATTTTGTTTGCCACCTTCTGGGGTCATTCCTCTTCACAATCAC
genomic: GAGTGCCAAGAATCACGTACCTGCACATATATGAGTGTGAAAAGTTCTCGgtacttactc ... tgttgcacagATGGGGATATTTTGTTTGCCACCTTCTGGGGTCATTCCTCTTCACAATCAC
EST: gi|24206164|gb|BU965417.1|BU965417
EST:     GAGTGCCAAGAATCCCGTACCTGCACATATATGAGTGTGAAAAGTTCTCG                         ATGGGGATATTTTGTTTGCCACCTTCTGGGGTCATTCCTCCTCACAATCAC
genomic: GAGTGCCAAGAATCACGTACCTGCACATATATGAGTGTGAAAAGTTCTCGgtacttactc ... tgttgcacagATGGGGATATTTTGTTTGCCACCTTCTGGGGTCATTCCTCTTCACAATCAC
EST: gi|254339339|gb|GR848056.1|GR848056
EST:     GAAAAGTTCTTCG                         ATGGGGATATTTTGTTTGCCACCTTCTGGGGTCATTCCTCTTCACAATCA
genomic: GAAAAGTTC-TCGgtacttactc ... tgttgcacagATGGGGATATTTTGTTTGCCACCTTCTGGGGTCATTCCTCTTCACAATCA