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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CGAGTTGAAGCGCACACAACGTGACCGAGCCGCATGGTTGACTCCCTCACACGACCCTCTTCTTCACACCGTCGCTCAAAATCTCTTGGACCGCTTGCAGgttcctttagttacttagcttcccttcccttctaaattccaacttcaattctctgttgttgtttag

Basic information

species Glycine max
transcript GLYMA12G37130.2
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|13125368|gb|BG315938.1|BG315938
EST:     ACGACCCTCTTCTTCACACCGTCGCTCAAAATCTCTTGGACCGCTTGCAG                         GACTGTAAGAAGACTTTTCCAACTGCGCTATGCTTAGGAGGCTCATTACAA
genomic: ACGACCCTCTTCTTCACACCGTCGCTCAAAATCTCTTGGACCGCTTGCAGgttcctttag ... tgttgtttagGACTGTAAGAAGACTTTTCCAACTGCGCTATGCTTAGGAGGCTCATTACAA
EST: gi|192297062|gb|FG990333.1|FG990333
EST:     ACGACCCTCTTCTTCACACCGTCGCTCAAAATCTCTTGGACCGCTTGCAG                         GACTGTAAGAAGACTTTTCCAACTGCGCTATGCTTAGGAGGCTCATTACAA
genomic: ACGACCCTCTTCTTCACACCGTCGCTCAAAATCTCTTGGACCGCTTGCAGgttcctttag ... tgttgtttagGACTGTAAGAAGACTTTTCCAACTGCGCTATGCTTAGGAGGCTCATTACAA