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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CAGCCAGCACAAGAGAGTGGCCAAGGGAAATCATGTCACATATAGATACTTCAATTATTCTTCTGGTTTTATACATCACTGCACCCTTAGAGATTTAGAGgtaagagggcatgtaattactgcaacacctaactcttgtctattttattttaggcaaatggtgagaacactgattaaggaattttataaaggtttttatt...

Basic information

species Glycine max
transcript GLYMA12G34960.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298184636|gb|HO029849.1|HO029849
EST:     TCAATTATTCTTCTGGTTTTATACATCACCGCACCCTTACAGATTTAGAG                         TTTAACACAAAATATTATTATGAAGTTGGAATTGGGCATACTACTAGGCAA
genomic: TCAATTATTCTTCTGGTTTTATACATCACTGCACCCTTAGAGATTTAGAGgtaagagggc ... attttggcagTTTAACACAAAATATTATTATGAAGTTGGAATTGGGCATACTACTAGGCAA
EST: gi|18040173|gb|BM308467.1|BM308467
EST:     TCAATTATTCTTCTGGTTTTATACATCACTGCACCCTTAGAGATTTAGAG                         TTTAACACAAAATATTATTATGAAGTTGGAATTGGGCATACTACTAGGCAA
genomic: TCAATTATTCTTCTGGTTTTATACATCACTGCACCCTTAGAGATTTAGAGgtaagagggc ... attttggcagTTTAACACAAAATATTATTATGAAGTTGGAATTGGGCATACTACTAGGCAA
EST: gi|298177766|gb|HO027319.1|HO027319
EST:     TCAATTATTCTTCTGGTTTTATACATCACTGCACCCTTACAGATTTAGAG                         TTTAACACAAAATATTATTATGAAGTTGGAATTGGGCATACTACTAGGCAA
genomic: TCAATTATTCTTCTGGTTTTATACATCACTGCACCCTTAGAGATTTAGAGgtaagagggc ... attttggcagTTTAACACAAAATATTATTATGAAGTTGGAATTGGGCATACTACTAGGCAA
EST: gi|16997191|gb|BM086563.1|BM086563
EST:     TCAATTATTCTTCTGGTTTTATACATCACTGCACCCTTAGAGATTTAGAG                         TTTAACACAAAATATTATTATGAAGTTGGAATTGGGCATACTACTAGGCAA
genomic: TCAATTATTCTTCTGGTTTTATACATCACTGCACCCTTAGAGATTTAGAGgtaagagggc ... attttggcagTTTAACACAAAATATTATTATGAAGTTGGAATTGGGCATACTACTAGGCAA
EST: gi|18735287|gb|BM528677.1|BM528677
EST:     TCAATTATTCTTCTGGTTTTATACATCACTGCACCCTTAGAGATTTAGAG                         TTTAACACAAAATATTATTATGAAGTTGGAATTGGGCATACTACTAGGCAA
genomic: TCAATTATTCTTCTGGTTTTATACATCACTGCACCCTTAGAGATTTAGAGgtaagagggc ... attttggcagTTTAACACAAAATATTATTATGAAGTTGGAATTGGGCATACTACTAGGCAA