1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
AGTGGAGCAGCTTGGAGTGGATAAGGCTGTGCCTTCAAGGATTTTGGAGATTATGGGAATTGACTGTCTCACCCGCCATAACATTGCAAGCCACCTTCAAgtacatatattcttcaactttgacccttacctagcttgcattgattttcaatctcttcaataaatttcattccccaagagtccaagactcattaagatcg...
species | Glycine max |
transcript | GLYMA12G33430.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TTATGGGAATTGACTGTCTCACCCGCCATAACATTGCAAGCCACCTTCAA AAATATAGATCGCATAGGAAGCATTTGCTAGCGCGTGAAGCTGAAGCAGCAEST: gi|6483010|gb|AW202145.1|AW202145
genomic: TTATGGGAATTGACTGTCTCACCCGCCATAACATTGCAAGCCACCTTCAAgtacatatat ... ggtgtggcagAAATATAGATCGCATAGGAAGCATTTGCTAGCGCGTGAAGCTGAAGCAGCA
EST: TTATGGGAATTGACTGTCTCACCCGCCATAACATTGCAAGCCACCTTCAA AAATATAGATCGCATAGGAAGCATTTGCTAGCCCGTGAAGCTGAAGCCGCAEST: gi|20811602|gb|BQ296080.1|BQ296080
genomic: TTATGGGAATTGACTGTCTCACCCGCCATAACATTGCAAGCCACCTTCAAgtacatatat ... ggtgtggcagAAATATAGATCGCATAGGAAGCATTTGCTAGCGCGTGAAGCTGAAGCAGCA
EST: TTATGGGAATTGACTGTCTCACCCGCCATAACATTGCAAGCCACCTTCAA AAATATAGATCGCATAGGAAGCATTTGCTAGCGCGTGAAGCTGAAGCAGCAEST: gi|10845148|gb|BF068309.1|BF068309
genomic: TTATGGGAATTGACTGTCTCACCCGCCATAACATTGCAAGCCACCTTCAAgtacatatat ... ggtgtggcagAAATATAGATCGCATAGGAAGCATTTGCTAGCGCGTGAAGCTGAAGCAGCA
EST: TTATGGGAATTGACTGTCTCACCCGCCATAACATTGCAAGCCACCTTCAA AAATATAGATCGCATAGGAAGCATTTGCTAGCGCGTGAAGCTGAAGCAGCAEST: gi|120533943|gb|EH262076.1|EH262076
genomic: TTATGGGAATTGACTGTCTCACCCGCCATAACATTGCAAGCCACCTTCAAgtacatatat ... ggtgtggcagAAATATAGATCGCATAGGAAGCATTTGCTAGCGCGTGAAGCTGAAGCAGCA
EST: TTATGGGAATTGACTGTCTCACCCGCCATAACATTGCAAGCCACCTTCAA AAATATAGATCGCATAGGAAGCATTTGCTAGCGCGTGAAGCTGAAGCAGCAEST: gi|22522235|gb|BU081038.1|BU081038
genomic: TTATGGGAATTGACTGTCTCACCCGCCATAACATTGCAAGCCACCTTCAAgtacatatat ... ggtgtggcagAAATATAGATCGCATAGGAAGCATTTGCTAGCGCGTGAAGCTGAAGCAGCA
EST: TTATGGGAATTGACTGTCTCACCCGCCATAACATTGCAAGCCACCTTCAA AAATATAGATCGCATAGGAAGCATTTGCTAGCGCGTGAAGCTGAAGCAGCA
genomic: TTATGGGAATTGACTGTCTCACCCGCCATAACATTGCAAGCCACCTTCAAgtacatatat ... ggtgtggcagAAATATAGATCGCATAGGAAGCATTTGCTAGCGCGTGAAGCTGAAGCAGCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGTGGAGCAGCTTGGAGTGGATAAGGCTGTGCCTTCAAGGATTTTGGAGATTATGGGAATTGACTGTCTCACCCGCCATAACATTGCAAGCCACCTTCAAgtacatatattcttcaactttgacccttacctagcttgcattgattttcaatctcttcaataaatttcattccccaagagtccaagactcattaagatcg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cccttacc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tccccaa