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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTACGTGTTGAAGAAAATCAGGCTCGCGCGGCAGACTGAACGATGCAGAAGATCTGCTCATCAAGAGgtaggcttttggtttcttcaatttcttgcttgttgatttgcttcgtgctctgtgatttgaccgttgttggctgttttgggaattgtag

Basic information

species Glycine max
transcript GLYMA12G31330.1
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA12G31330.1 (Glycine max), 5'ss of exon 2
lower sequence: EFJ20709 (Selaginella moellendorffii), 5'ss of exon 2
GTACGTGTTGAAGAAAATCAGGCTCGCGCGGCAGACTGAACGATGCAGAAGATCTGCTCATCAAGAGgtag-gcttttggtttcttcaatttcttgcttgttgatttgcttcgtgctctgtgatttgaccgttgttggctgttttgggaattgtag
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ATATGTGTTGAAGAAAATCAGGCTTGCGCGACAGACTGATAGGTGCAGGAGATCTGCTCATCAAGAGgtaaagccttttcctttctggattcctttcacga-gacagaatttgtg---taaatttcgaag--------------------------