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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTTCCTTTTTTAATTTTATCTTCATTTTTGTGATTTTCTCTTTTCAGTTGCTCGACTAAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAATgtaaactatactcttccattctcatttccacgcatcgtttctgtctcccaacttgatttgatttgatttgatttttcag

Basic information

species Glycine max
transcript GLYMA12G28670.2
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208079367|gb|GD877095.1|GD877095
EST:     ACAACGCTTTGTTCTCATCTTCTGCCATTGATAAT                         GCCCACATTGACCAGTGGATTGATTTTTCATCCTTGGAGATCGATGCTAAT
genomic: ACAACGCTTTGTTCTCATCTTCTGCCATTGATAATgtaaactata ... gatttttcagGCCCACATTGACCAGTGGATTGATTTTTCATCCTTGGAGATCGATGCTAAT
EST: gi|12689164|gb|BG155500.1|BG155500
EST:     GACAACGCTTTGTTCTCATCTTCTGCCATGGATAAT                         GCCCACATTGACCAGTGGATTGATTTTTCATCCTTGGAGATCGATGCTAAT
genomic: GACAACGCTTTGTTCTCATCTTCTGCCATTGATAATgtaaactata ... gatttttcagGCCCACATTGACCAGTGGATTGATTTTTCATCCTTGGAGATCGATGCTAAT
EST: gi|254316505|gb|GR828042.1|GR828042
EST:     CTCGACTAAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAAT                         GCCCACATTGACCAGTGGATTGATTTTTCATCCTTGGAGATCGATGCTAAT
genomic: CTCGACTAAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAATgtaaactata ... gatttttcagGCCCACATTGACCAGTGGATTGATTTTTCATCCTTGGAGATCGATGCTAAT