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GATGGAACAGCTAAAGGAAAAGGGTCAGGGCAATCAAGTTATAGTGGAGGTGCATTTTATACTACTgtaagttttccttttcctctaactgagatttgtttcagtaaaatacatcactttatgaaataatattttaacaaataaaggaatcagttggttgttgact...
species | Glycine max |
transcript | GLYMA12G11820.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GAAAAGGGTCAGGGCAATCAAGTTATAGTGGAGGTGCATTTTATACTACT AACACTGGAAGTGTTCCCTCTGCAAACTCAAGGCTCTCGCCCCTTCCTCCAEST: gi|213599371|gb|DB970347.1|DB970347
genomic: GAAAAGGGTCAGGGCAATCAAGTTATAGTGGAGGTGCATTTTATACTACTgtaagttttc ... gaatttgcagAACACTGGAAGTGTTCCCTCTGCAAACTCAAGGCTCTCGCCCCTTCCTCCA
EST: GAAAAGGGTCAGGGCAATCAAGTTATAGTGGAGGTGCATTTTATACTACT AACACTGGAAGTGTTCCCTCTGCAAGCTCAAGGCTCTCGCCCCTTCCTCCAEST: gi|298174331|gb|HO017667.1|HO017667
genomic: GAAAAGGGTCAGGGCAATCAAGTTATAGTGGAGGTGCATTTTATACTACTgtaagttttc ... gaatttgcagAACACTGGAAGTGTTCCCTCTGCAAACTCAAGGCTCTCGCCCCTTCCTCCA
EST: GAAAAGGGTCAGGGCAATCGAGTTATAGTGGAGGTGCATTTTATACTACT AACACTGGAAGTGTTCCCTCTGCAAACTCAAGGCTCTCGCCCCTTCCTCCAEST: gi|15813443|gb|BI785718.1|BI785718
genomic: GAAAAGGGTCAGGGCAATCAAGTTATAGTGGAGGTGCATTTTATACTACTgtaagttttc ... gaatttgcagAACACTGGAAGTGTTCCCTCTGCAAACTCAAGGCTCTCGCCCCTTCCTCCA
EST: GAAAAGGGTCAGGGCAATCAAGTTATAGTGGAGGTGCATTTTATACTACT AACACTGGAAGTGTTCCCTCTGCAAACTCAAGGCTCTCGCCCCTTCCTCCAEST: gi|7924737|gb|AW830763.1|AW830763
genomic: GAAAAGGGTCAGGGCAATCAAGTTATAGTGGAGGTGCATTTTATACTACTgtaagttttc ... gaatttgcagAACACTGGAAGTGTTCCCTCTGCAAACTCAAGGCTCTCGCCCCTTCCTCCA
EST: AAAAGGGTCAGGGCAATCAAGTTATAGTGGAGGTGCATTTTATACTANCT AACACTGGAAGTGTTCCCTCTGCAAACTCAAGGCTCTCGCCCCTTCCTCCEST: gi|13787288|gb|BG649880.1|BG649880
genomic: AAAAGGGTCAGGGCAATCAAGTTATAGTGGAGGTGCATTTTATACTA-CTgtaagttttc ... gaatttgcagAACACTGGAAGTGTTCCCTCTGCAAACTCAAGGCTCTCGCCCCTTCCTCC
EST: GAAAAGGGTCAGGGCAATCAAGTTATAGTGGAGGTGCATTTTATACTACT AACACTGGAAGTGTTCCCTCTGCAAACTCAAGGCTCTCGCCCCTTCCTCCA
genomic: GAAAAGGGTCAGGGCAATCAAGTTATAGTGGAGGTGCATTTTATACTACTgtaagttttc ... gaatttgcagAACACTGGAAGTGTTCCCTCTGCAAACTCAAGGCTCTCGCCCCTTCCTCCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATGGAACAGCTAAAGGAAAAGGGTCAGGGCAATCAAGTTATAGTGGAGGTGCATTTTATACTACTgtaagttttccttttcctctaactgagatttgtttcagtaaaatacatcactttatgaaataatattttaacaaataaaggaatcagttggttgttgact
- - - - - - - - - - - - - - - - - - - - - AGTGGA
- - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccttttcc