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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CGGTGGATATATGGTGGCATTTGCGGGAAAGAAATATGCTGCACGTTCTCCACTTGCGTTTGTCGCAAACAGCACATACACCGTGACAAGTTTTACACTGgtaagagttgtgaatcatggacctgatgagttgagtttttggtctgttattgaaaggcttggttggagtttccatttgattag

Basic information

species Glycine max
transcript GLYMA12G10140.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|58017532|gb|CX704274.1|CX704274
EST:     CACTTGCGTTTGTCGCAAACAGCACATACACCGTGACAAGTTTTACACTG                         GTGCTAGAGTTTCAGAGGGGTAGGCTGCATAACTTGTACTGGAAGAGAGAC
genomic: CACTTGCGTTTGTCGCAAACAGCACATACACCGTGACAAGTTTTACACTGgtaagagttg ... atttgattagGTGCTAGAGTTTCAGAGGGGTAGGCTGCATAACTTGTACTGGAAGAGAGAC
EST: gi|58021465|gb|CX708206.1|CX708206
EST:     CACTTGCGTTTGTCGCAAACAGCACATACACCGTGACAAGTTTTACACTG                         GTGCTAGAGTTTCAGAGGGGTAGGCTGCATAACTTGTACTGGAAGAGAGAC
genomic: CACTTGCGTTTGTCGCAAACAGCACATACACCGTGACAAGTTTTACACTGgtaagagttg ... atttgattagGTGCTAGAGTTTCAGAGGGGTAGGCTGCATAACTTGTACTGGAAGAGAGAC
EST: gi|22930630|gb|BU547777.1|BU547777
EST:     CACTTGCGTTTGTCGCAAACAGCACATACACCGTGACAAGTTTTACACTG                         GTGCTAGAGTTTCAGAGGGGTAGGCTGCATAACTTGTACTGGAAGAGAGAC
genomic: CACTTGCGTTTGTCGCAAACAGCACATACACCGTGACAAGTTTTACACTGgtaagagttg ... atttgattagGTGCTAGAGTTTCAGAGGGGTAGGCTGCATAACTTGTACTGGAAGAGAGAC
EST: gi|58025311|gb|CX712052.1|CX712052
EST:     CACTTGCGTTTGTCGCAAACAGCACATACACCGTGACAAGTTTTACACTG                         GTGCTAGAGTTTCAGAGGGGTAGGCTGCATAACTTGTACTGGAAGAGAGAC
genomic: CACTTGCGTTTGTCGCAAACAGCACATACACCGTGACAAGTTTTACACTGgtaagagttg ... atttgattagGTGCTAGAGTTTCAGAGGGGTAGGCTGCATAACTTGTACTGGAAGAGAGAC
EST: gi|193576168|gb|FK532677.1|FK532677
EST:     CACTTGCGTTTGTCGCAAACAGCACATACACCGTGACAAGTTTTACACTG                         GTGCTAGAGTTTCAGAGGGGTAGGCTGCATAACTTGTACTGGAAGAGAGAC
genomic: CACTTGCGTTTGTCGCAAACAGCACATACACCGTGACAAGTTTTACACTGgtaagagttg ... atttgattagGTGCTAGAGTTTCAGAGGGGTAGGCTGCATAACTTGTACTGGAAGAGAGAC
EST: gi|207695386|gb|GD678127.1|GD678127
EST:     CTCTTGCGTTTGTCGCAAACAGCACATACACCGTGACAAGTTTTACACTG                         GTGCTAGAGTTTCAGAGGGGTAGGCTGCATAACTTGTACTGGAAGAGAGAC
genomic: CACTTGCGTTTGTCGCAAACAGCACATACACCGTGACAAGTTTTACACTGgtaagagttg ... atttgattagGTGCTAGAGTTTCAGAGGGGTAGGCTGCATAACTTGTACTGGAAGAGAGAC
EST: gi|22933437|gb|BU550576.1|BU550576
EST:     GTTTTACACTG                         GTGCTAGAGTTNNAGAGGGGTAGGCTGCATAACTTGTACTGGAAGAGAGAC
genomic: GTTTTACACTGgtaagagttg ... atttgattagGTGCTAGAGTTTCAGAGGGGTAGGCTGCATAACTTGTACTGGAAGAGAGAC