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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGATTGCATTTGAATTCCTGTAATGGCGgtaagttactagctactaaatttgttatttttctttccttactcgtttttttcccttcagctgaggatttcttttgtggtgaatgctgtag

Basic information

species Glycine max
transcript GLYMA12G09250.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|7591500|gb|AW707232.1|AW707232
EST:     GTGATTGCATTTGAATTCCTGTAATGGCG                         ATTGATAATATTTTTAAAAATGAAGCTAGTGAAGAAAAAGGAGAGCGTGCC
genomic: GTGATTGCATTTGAATTCCTGTAATGGCGgtaagttact ... aatgctgtagATTGATAATATTTTTAAAAATGAAGCTAGTGAAGAAAAAGGAGAGCGTGCC
EST: gi|193729723|gb|FK664669.1|FK664669
EST:     GTGATTGCATTTGAATTCCTGTAATGGCG                         ATTGATAATATTTTTTAAAAAATGAAGCTAGTGAAGAAAAAGGAGAGCGTG
genomic: GTGATTGCATTTGAATTCCTGTAATGGCGgtaagttact ... aatgctgtagATTGATAATA-TTTTT-AAAAATGAAGCTAGTGAAGAAAAAGGAGAGCGTG
EST: gi|192302430|gb|FG996684.1|FG996684
EST:     GTGATTGCATTTGAATTCCTGTAATGGCG                         ATTGATAATATTTTTAAAAATGAAGCTAGTGAAGAAAAAGGAGAGCGTGCC
genomic: GTGATTGCATTTGAATTCCTGTAATGGCGgtaagttact ... aatgctgtagATTGATAATATTTTTAAAAATGAAGCTAGTGAAGAAAAAGGAGAGCGTGCC
EST: gi|15200734|gb|BI424502.1|BI424502
EST:     GTGATTGCATTTGAATTCCTGTAATGGCG                         ATTGATAATATTTTTAAAAATGAAGCTAGTGAAGAAAAAGGAGAGCGTGCC
genomic: GTGATTGCATTTGAATTCCTGTAATGGCGgtaagttact ... aatgctgtagATTGATAATATTTTTAAAAATGAAGCTAGTGAAGAAAAAGGAGAGCGTGCC
EST: gi|213601247|gb|DB956527.1|DB956527
EST:     GTGATTGCATTTGAATTCCTGTAATGGCG                         ATTGATAATATTTTTAAAAATGAAGCTAGTGAAGAAAAAGGAGAGCGTGCC
genomic: GTGATTGCATTTGAATTCCTGTAATGGCGgtaagttact ... aatgctgtagATTGATAATATTTTTAAAAATGAAGCTAGTGAAGAAAAAGGAGAGCGTGCC
EST: gi|261497099|gb|GT185167.1|GT185167
EST:     GTGATTGCATTTGAATTCCTGTAATGGCG                         ATTGATAATATTTTTAAAAATGAAGCTAGTGAAGAAAAAGGAGAGCGTGCC
genomic: GTGATTGCATTTGAATTCCTGTAATGGCGgtaagttact ... aatgctgtagATTGATAATATTTTTAAAAATGAAGCTAGTGAAGAAAAAGGAGAGCGTGCC