1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TTCAATACCATTAAAAACATTGCGCGGAGCTAGTCGGTCGTTGAGAGTGGATCAATTTTGCAGTGTAGTGAATCTATCTTCCTCATTGCAGATAGAATTGgtgagcagatctcttcttcctttttataaggcttttgtgatgcaattagattagtatttagtcactcaagttgctcaagctaataagctctggagccatatgctgaaatcctagcatgtgctgtgtttcttatctcatttttctttaattgttag
species | Glycine max |
transcript | GLYMA12G05470.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CAATTTTGCAGTGTAGTGAATCTATCTTCCTCATTGCAGATAGAATTG GTTCCATGTCTTAGGGACAATTATGCATATCTTTTACACGATGTGGATACGEST: gi|15285766|gb|BI469657.1|BI469657
genomic: CAATTTTGCAGTGTAGTGAATCTATCTTCCTCATTGCAGATAGAATTGgtgagcagat ... taattgttagGTTCCATGTCTTAGGGACAATTATGCATATCTTTTACACGATGTGGATACG
EST: ATCAATTTTGCAGTGTAGTGAATCTATCTTCCTCATTGCAGATAGAATTG GTTCCATGTCTTAGGGACAATTATGCATATCTTTTACACGATGTGGATACGEST: gi|193588939|gb|FK540981.1|FK540981
genomic: ATCAATTTTGCAGTGTAGTGAATCTATCTTCCTCATTGCAGATAGAATTGgtgagcagat ... taattgttagGTTCCATGTCTTAGGGACAATTATGCATATCTTTTACACGATGTGGATACG
EST: TTTGCAGTGTAGTGAATCTATCTTCCTCATTGCAGATAGAATTG GTTCCATGTCTTAGGGACAATTATGCATATCTTTTACACGATGTGGATACGEST: gi|254348345|gb|GR852024.1|GR852024
genomic: TTTGCAGTGTAGTGAATCTATCTTCCTCATTGCAGATAGAATTGgtgagcagat ... taattgttagGTTCCATGTCTTAGGGACAATTATGCATATCTTTTACACGATGTGGATACG
EST: ATCAATTTTGCAGTGTAGTGAATCTATCTTCCTCATTGCAGATAGAATTG GTTCCATGTCTTAGGGACAATTATGCATATCTTTTACACGATGTGGATACGEST: gi|151393711|gb|EV263586.1|EV263586
genomic: ATCAATTTTGCAGTGTAGTGAATCTATCTTCCTCATTGCAGATAGAATTGgtgagcagat ... taattgttagGTTCCATGTCTTAGGGACAATTATGCATATCTTTTACACGATGTGGATACG
EST: ATCAATTTTGCAGTGTAGTGAATCTATCTTCCTCATTGCAGATAGAATTG GTTCCATGTCTTAGGGACAATTATGCATATCTTTTACACGATGTGGATACGEST: gi|17401071|gb|BM177853.1|BM177853
genomic: ATCAATTTTGCAGTGTAGTGAATCTATCTTCCTCATTGCAGATAGAATTGgtgagcagat ... taattgttagGTTCCATGTCTTAGGGACAATTATGCATATCTTTTACACGATGTGGATACG
EST: ATCAATTTTGCAGTGTAGTGAATCTATCTTCCTCATTGCAGATAGAATTG GTTCCATGTCTTAGGGACAATTATGCATATCTTTTACACGATGTGGATACG
genomic: ATCAATTTTGCAGTGTAGTGAATCTATCTTCCTCATTGCAGATAGAATTGgtgagcagat ... taattgttagGTTCCATGTCTTAGGGACAATTATGCATATCTTTTACACGATGTGGATACG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTCAATACCATTAAAAACATTGCGCGGAGCTAGTCGGTCGTTGAGAGTGGATCAATTTTGCAGTGTAGTGAATCTATCTTCCTCATTGCAGATAGAATTGgtgagcagatctcttcttcctttttataaggcttttgtgatgcaattagattagtatttagtcactcaagttgctcaagctaataagctctggagccatatgctgaaatcctagcatgtgctgtgtttcttatctcatttttctttaattgttag
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