1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GGACCCATCTGAGGAAAAAATTGTTGAGAATTTTCTCGATGAAGAGGGAGTTCAGGAGGACAACAAGTTCAAAATTTTGAAGATCATCAAAGGAATGGgtgagtttgaggaaaatttaaatcttttggctccacaacattgttttcaccttttgtttttctttaattgaaattaatataacttcaggctttaatgtgg...
species | Glycine max |
transcript | GLYMA12G02920.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AGTTCAGGAGGACAACAAGTTCAAAATTTTGAAGATCATCAAAGGAATGG GTTTCGAGGAAGAAGTGTCAGGAAGTGGAAATAGTGAAGGGTTTCCAGAATEST: gi|193414153|gb|FK377853.1|FK377853
genomic: AGTTCAGGAGGACAACAAGTTCAAAATTTTGAAGATCATCAAAGGAATGGgtgagtttga ... caatgttcagGTTTCAAGGAAGAAGTGTCAGGAAGTGGAAATAGTGAAGGGTTTCCAGAAT
EST: AGTTCAGGAGGACAACAAGTTCAAAATTTTGAAGATCATCAAAGGAATGG GTTTCGAGGAAGAAGTGTCAGGAAGTGGAAATAGTGAAGGGTTTCCAGAATEST: gi|58022079|gb|CX708820.1|CX708820
genomic: AGTTCAGGAGGACAACAAGTTCAAAATTTTGAAGATCATCAAAGGAATGGgtgagtttga ... caatgttcagGTTTCAAGGAAGAAGTGTCAGGAAGTGGAAATAGTGAAGGGTTTCCAGAAT
EST: AAGATCATCAAAGGAATGG G-TTCAANGG-AGAAAGTGTCAGGAAGTGGAAATAGTGAAGGGTTTCCAGAEST: gi|7326570|gb|AW620368.1|AW620368
genomic: AAGATCATCAAAGGAATGGgtgagtttga ... caatgttcagGTTTCAA-GGAAG-AAGTGTCAGGAAGTGGAAATAGTGAAGGGTTTCCAGA
EST: AGTTCAGGAGGACAACAAGTTCAAAATTTTGAAGATCATCAAAGGAATGG GTTTCAAGGAAGAAGTGTCAGGAAGTGGAAATAGTGAAGGGTTTCCAGAATEST: gi|193436738|gb|FK400883.1|FK400883
genomic: AGTTCAGGAGGACAACAAGTTCAAAATTTTGAAGATCATCAAAGGAATGGgtgagtttga ... caatgttcagGTTTCAAGGAAGAAGTGTCAGGAAGTGGAAATAGTGAAGGGTTTCCAGAAT
EST: AGTTCAGGAGGACAACAAGTTCAAAATTTTGAAGATCATCAAAGGAATGG GTTTCGAGGAAGAAGTGTCAGGAAGTGGAAATAGTGAAGGGTTTCCAGAAT
genomic: AGTTCAGGAGGACAACAAGTTCAAAATTTTGAAGATCATCAAAGGAATGGgtgagtttga ... caatgttcagGTTTCAAGGAAGAAGTGTCAGGAAGTGGAAATAGTGAAGGGTTTCCAGAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGACCCATCTGAGGAAAAAATTGTTGAGAATTTTCTCGATGAAGAGGGAGTTCAGGAGGACAACAAGTTCAAAATTTTGAAGATCATCAAAGGAATGGgtgagtttgaggaaaatttaaatcttttggctccacaacattgttttcaccttttgtttttctttaattgaaattaatataacttcaggctttaatgtgg
- - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGATCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA