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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAATCATCTTCACCTCCAGCCAGGAAGATAACAAAGGATGTTGGCCATGGGTTTGCATCATCTGATTCTGAAACTGCTGGTGCTTATTTTAGCTGGCTGgtattacatacttctcttttggttgttttctgaatttcacaatgataaggtggttgtttatgctatttcttttttcatatttgttaatttcacag

Basic information

species Glycine max
transcript GLYMA12G00790.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|14259595|gb|BG882503.1|BG882503
EST:     GGTTTGCATCATCTGATTCTGAAACTGCTGGTGCTTATTTTAGCTGGCTG                         CTAAAATACCCATCCGCACTTGCATCTTTTGATCAAATCATGAACTATGCA
genomic: GGTTTGCATCATCTGATTCTGAAACTGCTGGTGCTTATTTTAGCTGGCTGgtattacata ... aatttcacagCTAAAATACCCATCCGCACTTGCATCTTTTGATCAAATCATGAACTATGCA
EST: gi|27445792|gb|CA952915.1|CA952915
EST:     GGTTTGCATCATCTGATTCTGAAACTGCTGGTGCTTATTTTAGCTGGCTG                         CTAAAATACCCATCCGCACTTGCATCTTTTGATCAAATCATGAACTATGCA
genomic: GGTTTGCATCATCTGATTCTGAAACTGCTGGTGCTTATTTTAGCTGGCTGgtattacata ... aatttcacagCTAAAATACCCATCCGCACTTGCATCTTTTGATCAAATCATGAACTATGCA
EST: gi|18733283|gb|BM527521.1|BM527521
EST:     GGTTTGCATCATCTGATTCTGAAACTGCTGGTGCTTATTTTAGCTGGCTG                         CTAAAATACCCATCCGCACTTGCATCTTTTGATCAAATCATGAACTATGCA
genomic: GGTTTGCATCATCTGATTCTGAAACTGCTGGTGCTTATTTTAGCTGGCTGgtattacata ... aatttcacagCTAAAATACCCATCCGCACTTGCATCTTTTGATCAAATCATGAACTATGCA