1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
TTGGAACTCCTATGATTCCTTTTGCTGGACAATTTCTGAAGAAGAATTCTTACAGAGTGCTGAAATAGTTTCTCAACGTCTCCATGATCATGGATACGAGgtatagtttctgaggaaccatagctaatggatgagtttgaagttagtagtactttcattagatatagacatgataaccttccttcaaacccttgtag
species | Glycine max |
transcript | GLYMA11G37760.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TACAGAGTGCTGAAATAGTTTCTCAACGTCTCCATGATCATGGATACGAG TATGTTGTAGTGGATTACCTCTGGTATAGAAGGAAAGTAGAGGGCGCTTATEST: gi|33390450|gb|CA853645.1|CA853645
genomic: TACAGAGTGCTGAAATAGTTTCTCAACGTCTCCATGATCATGGATACGAGgtatagtttc ... acccttgtagTATGTTGTAGTGGATTACCTCTGGTATAGAAGGAAAGTAGAGGGCGCTTAT
EST: TACAGAGTGCTGAAATAGTTTCTCAACGTCTCCATGATCATGGATACGAG TATGTTGTAGTGGATTACCTCTGGTATAGAAGGAAAGTAGAGGGCGCTTATEST: gi|14126596|gb|BG791034.1|BG791034
genomic: TACAGAGTGCTGAAATAGTTTCTCAACGTCTCCATGATCATGGATACGAGgtatagtttc ... acccttgtagTATGTTGTAGTGGATTACCTCTGGTATAGAAGGAAAGTAGAGGGCGCTTAT
EST: TACAGAGTGCTGAAATAGTTTCTCAACGTCTCCATGATCATGGATACGAG TATGTTGTAGTGGATTACCTCTGGTATAGAAGGAAAGTAGAGGGCGCTTATEST: gi|193724680|gb|FK658048.1|FK658048
genomic: TACAGAGTGCTGAAATAGTTTCTCAACGTCTCCATGATCATGGATACGAGgtatagtttc ... acccttgtagTATGTTGTAGTGGATTACCTCTGGTATAGAAGGAAAGTAGAGGGCGCTTAT
EST: TACAGAGTGCTGAAATAGTTTCTCAACGTCTCCATGATCATGGATACGAG TATGTTGTAGTGGATTACCTCTGGTATAGAAGGAAAGTAGAGGGCGCTTATEST: gi|209717413|gb|BW659075.1|BW659075
genomic: TACAGAGTGCTGAAATAGTTTCTCAACGTCTCCATGATCATGGATACGAGgtatagtttc ... acccttgtagTATGTTGTAGTGGATTACCTCTGGTATAGAAGGAAAGTAGAGGGCGCTTAT
EST: TACAGAGTGCTGAAATAGTTTCTCAACGTCTCCATGATCATGGATACGAG TATGTTGTAGTGGATTACCTCTGGTATAGAAGGAAAGTAGAGGGCGCTTATEST: gi|209712740|gb|BW681594.1|BW681594
genomic: TACAGAGTGCTGAAATAGTTTCTCAACGTCTCCATGATCATGGATACGAGgtatagtttc ... acccttgtagTATGTTGTAGTGGATTACCTCTGGTATAGAAGGAAAGTAGAGGGCGCTTAT
EST: TACAGAGTGCTGAAATAGTTTCTCAACGTCTCCATGATCATGGATACGAG TATGTTGTAGTGGATTACCTCTGGTATAGAAGGAAAGTAGAGGGCGCTTATEST: gi|209708390|gb|BW665363.1|BW665363
genomic: TACAGAGTGCTGAAATAGTTTCTCAACGTCTCCATGATCATGGATACGAGgtatagtttc ... acccttgtagTATGTTGTAGTGGATTACCTCTGGTATAGAAGGAAAGTAGAGGGCGCTTAT
EST: TACAGAGTGCTGAAATAGTTTCTCAACGTCTCCATGATCATGGATACGAG TATGTTGTAGTGGATTACCTCTGGTATAGAAGGAAAGTAGAGGGCGCTTAT
genomic: TACAGAGTGCTGAAATAGTTTCTCAACGTCTCCATGATCATGGATACGAGgtatagtttc ... acccttgtagTATGTTGTAGTGGATTACCTCTGGTATAGAAGGAAAGTAGAGGGCGCTTAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTGGAACTCCTATGATTCCTTTTGCTGGACAATTTCTGAAGAAGAATTCTTACAGAGTGCTGAAATAGTTTCTCAACGTCTCCATGATCATGGATACGAGgtatagtttctgaggaaccatagctaatggatgagtttgaagttagtagtactttcattagatatagacatgataaccttccttcaaacccttgtag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA