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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTTGGCTCCTCTCTTCCTGTTATTTCTACAATGGATGGATTGTTCTTGTGCAGGCTTTCTCCATAGGTATCTCAACCTCTTCCACATACTTGTATACAAGgtatctatctatctatttatttctgttttactgttttggaatttggataataataataataataatacctatagactatatatgtttgattcatgtttttcttttgatgtttttgctctcgtattttaccaaag

Basic information

species Glycine max
transcript GLYMA11G37510.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|21602221|gb|BQ612552.1|BQ612552
EST:     CAGGCTTTCTCCATAGGTATCTCAACCTCTTCCACATACTTGTATACAAG                         GTACATAATGATGGTAGATCAATCATGTCTACTCATGGAAGGAAGGCTACC
genomic: CAGGCTTTCTCCATAGGTATCTCAACCTCTTCCACATACTTGTATACAAGgtatctatct ... tttaccaaagGTACATAATGATGGTAGATCAATCATGTCTACTCATGGAAGGAAGGCTACC
EST: gi|7686039|gb|AW756687.1|AW756687
EST:     CAGGCTTTCTCCATAGGTATCTCAACCTCTTCCACATACTTGTATACAAG                         GTACATAATGATGGTAGATCAATCATGTCTACTCATGGAAGGAAGGCTACC
genomic: CAGGCTTTCTCCATAGGTATCTCAACCTCTTCCACATACTTGTATACAAGgtatctatct ... tttaccaaagGTACATAATGATGGTAGATCAATCATGTCTACTCATGGAAGGAAGGCTACC