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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTCCTTGGCTGGTTTGGTTTCCTCTTCTGACTTTGCTACCCCAAATAAAGAAATTCAATGGCTGGGGTCTGTCTTCACTGGCATCATCTTCTGTGTTATTgtgagtaaaatgagttgttcatcaatttctcagtgtcttctatgttgcaaatggctcttatgtaaccatggaccaaattaggattttgaatgcttgatgg...

Basic information

species Glycine max
transcript GLYMA11G31750.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192314282|gb|FK007020.1|FK007020
EST:     AAATTCAATGGCTGGGGTCTGTCTTCACTGGCATCATCTTCTGTGTTATT                         GTTTATAGATTGACTGCTATTTTGAGTTCTCTGTTGTTCAAGGGATATGAC
genomic: AAATTCAATGGCTGGGGTCTGTCTTCACTGGCATCATCTTCTGTGTTATTgtgagtaaaa ... cttcttgaagGTTTATAGATTGACTGCTATTTTGAGTTCTCTGTTGTTCAAGGGATATGAC
EST: gi|192314283|gb|FK007021.1|FK007021
EST:     AAATTCAATGGCTGGGGTCTGTCTTCACTGGCATCATCTTCTGTGTTATT                         GTTTATAGATTGACTGCTATTTTGAGTTCTCTGTTGTTCAAGGGATATGAC
genomic: AAATTCAATGGCTGGGGTCTGTCTTCACTGGCATCATCTTCTGTGTTATTgtgagtaaaa ... cttcttgaagGTTTATAGATTGACTGCTATTTTGAGTTCTCTGTTGTTCAAGGGATATGAC