Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|16282055|gb|BI944811.1|BI944811EST: TGGGTATTTGCATCTCGTGGGTCGGATCAAGGAACTCATCAACCGAGGAG GTGAAAAGATATCACCAATAGAAGTGGATGCTGTTCTTCTTTCA
genomic: TGGGTATTTGCATCTCGTGGGTCGGATCAAGGAACTCATCAACCGAGGAGgtacatatat ... ttatttttagGTGAAAAGATATCACCAATAGAAGTGGATGCTGTTCT-CTTTCA
EST:
gi|16276512|gb|BI941900.1|BI941900EST: TCGGTATTTGCATCTCGTGGGTCGGATCAAGGAACTCATCAACCGAGGAG GTGAAAAGATATCACCAATAGAAGTGGATGCTGNTCTTCTCTCACATNCAG
genomic: TGGGTATTTGCATCTCGTGGGTCGGATCAAGGAACTCATCAACCGAGGAGgtacatatat ... ttatttttagGTGAAAAGATATCACCAATAGAAGTGGATGCTGTTCT-CTTTCACATCCAG
EST:
gi|16282051|gb|BI944809.1|BI944809EST: TGGGTATTTGCATCTCGTGGGTCGGATCAAGGAACTCATCAACCGAGGAG GTGAAAAGATATCACCAATAGAAGTGGATGCTGTTCTTCTTTTACATCCAG
genomic: TGGGTATTTGCATCTCGTGGGTCGGATCAAGGAACTCATCAACCGAGGAGgtacatatat ... ttatttttagGTGAAAAGATATCACCAATAGAAGTGGATGCTGTTCT-CTTTCACATCCAG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TTTCTGTTCGATTGGTTTCATACTGGTGATATTGGATACTTTGATTCTGATGGGTATTTGCATCTCGTGGGTCGGATCAAGGAACTCATCAACCGAGGAGgtacatatattatttctttataatataatattcattattcaaaaacgcataatttataattaatatatattcattaaagttttatctcactaatttacct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG