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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGCTGATTCTGGTGGCCATTTGCCGCCTCATAACTCTGGGTTTAATTCTACTATTACTGTCCTGACTCGAGCATTTGAGATTGCCACGACACAGACGCAGgtttgtggacggaaacgtgtaaatatgtattatgtgatgtatttgatgggtttttaggtgattgggtgggtcataatccttgttttctgtgtgtggttacag

Basic information

species Glycine max
transcript GLYMA11G21490.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208172746|gb|GD969349.1|GD969349
EST:     CCATTACTGTCCTGACTCGAGCATTTGAGATTGCCACGACACAGACGCAG                         GTTGAACAGCCTTTGTGCCTTGACTGCATGAGGATTTTGTCAGATAAGCTT
genomic: CTATTACTGTCCTGACTCGAGCATTTGAGATTGCCACGACACAGACGCAGgtttgtggac ... gtggttacagGTTGAACAGCCTTTGTGCCTTGACTGCATGAGGATTTTGTCAGATAAGCTT
EST: gi|208132732|gb|GD931225.1|GD931225
EST:     CTATTACTGTCCTGACTCGAGCATTTGAGATTGCCACGACACAGACGCAG                         GTTGAACAGCCTTTGTGCCTTGACTGCATGAGGATTTTGTCAGATAAGCTT
genomic: CTATTACTGTCCTGACTCGAGCATTTGAGATTGCCACGACACAGACGCAGgtttgtggac ... gtggttacagGTTGAACAGCCTTTGTGCCTTGACTGCATGAGGATTTTGTCAGATAAGCTT