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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTCCTATTGGCGTGTACGGAATTCAGCACTACTTTTCGATATTAGGTTCGTTGATTCTGATTCCGCTTGTGATTGTTCCTGCCATGGGAGGCACTCACgtgagtagttttcgtctggcttagttgttggtgtttttctgtgttgtgttgtgtttgagtgttttgattttggtggcaaagttgttaatgtgttagtgagtgtag

Basic information

species Glycine max
transcript GLYMA11G19420.1
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA11G19420.1 (Glycine max), 5'ss of exon 2
lower sequence: AT2G27810.3 (Arabidopsis thaliana), 5'ss of exon 2
TTCCTATTGGCGTGTACGGAATTCAGCACTACTTTTCGATATTAGGTTCGTTGATTCTGATTCCGCTTGTGATTGTTCCTGCCATGGGAGGCACTCACgtgagtagttttcgtctggcttagttgttggtgtttttctgtgttgtgt-tgtgtttgagtgttttgattttggtggcaaagttgttaatgtgttagtgagtgtag
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TTCCAATTGGGTTCTATGGTTTGCAGCATTACCTTTCAATGTTGGGATCATTGATTCTGGTTCCACTTGTTATTGTTCCTGCAATGGGAGGTTCACATgtaagtgtgattcttttggactctctactttggacaatgatgattgcaaatgtaatttcaactttttttttggattatag--------------------------