Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|192320459|gb|FK012317.1|FK012317EST: GTTATGCATTAATTAGCGCTGGAATTGATGTACAATCTTTACTGCAGAAG GTTGGAATCTCAACTGATGCGACTGGAGAGAAAGTTGGTACCTTTGCATTG
genomic: GTTATGCATTAATTAGCGCTGGAATTGATGTACAATCTTTACTGCAGAAGgtgcaacaca ... ttatcctcagGTTGGAATCTCAACTGATGCGACTGGAGAGAAAGTTGGTACCTTTGCATTG
EST:
gi|209727232|gb|BW655243.1|BW655243EST: GTTATGCATTAATTAGCGCTGGAATTGATGTACAATCTTTACTGCAGAAG GTTGGAATCTCAACTGATGCGACTGGAGAGAAAGTTGGTACCTTTGCATTG
genomic: GTTATGCATTAATTAGCGCTGGAATTGATGTACAATCTTTACTGCAGAAGgtgcaacaca ... ttatcctcagGTTGGAATCTCAACTGATGCGACTGGAGAGAAAGTTGGTACCTTTGCATTG
EST:
gi|209725059|gb|BW659781.1|BW659781EST: GTTATGCATTAATTAGCGCTGGAATTGATGTACAATCTTTACTGCAGAAG GTTGGAATCTCAACTGATGCGACTGGAGAGAAAGTTGGTACCTTTGCATTG
genomic: GTTATGCATTAATTAGCGCTGGAATTGATGTACAATCTTTACTGCAGAAGgtgcaacaca ... ttatcctcagGTTGGAATCTCAACTGATGCGACTGGAGAGAAAGTTGGTACCTTTGCATTG
EST:
gi|209725060|gb|BW659782.1|BW659782EST: GTTATGCATTAATTAGCGCTGGAATTGATGTACAATCTTTACTGCAGAAG GTTGGAATCTCAACTGATGCGACTGGAGAGAAAGTTGGTACCTTTGCATTG
genomic: GTTATGCATTAATTAGCGCTGGAATTGATGTACAATCTTTACTGCAGAAGgtgcaacaca ... ttatcctcagGTTGGAATCTCAACTGATGCGACTGGAGAGAAAGTTGGTACCTTTGCATTG
EST:
gi|192320458|gb|FK012316.1|FK012316EST: GTTATGCATTAATTAGCGCTGGAATTGATGTACAATCTTTACTGCAGAAG GTTGGAATCTCAACTGATGCGACTGGAGAGAAAGTTGGTACCTTTGCATTG
genomic: GTTATGCATTAATTAGCGCTGGAATTGATGTACAATCTTTACTGCAGAAGgtgcaacaca ... ttatcctcagGTTGGAATCTCAACTGATGCGACTGGAGAGAAAGTTGGTACCTTTGCATTG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AGCATACTTAGCCACCTCCATTACTCTGTCATTGATCTCTTTCGCACTATGTTATGCATTAATTAGCGCTGGAATTGATGTACAATCTTTACTGCAGAAGgtgcaacacaaactaaacctaatgtagattgcaatcaaattgaaaacaaaacaattgcttcggattaataaattgcgtgtttatcctcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG