1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TCCCGATAACTCAAACTCGAAGATATCCTCACCAAATTACAAAAGGAGCTTTTCTCACAATGATGCTGGTACAAGTGATAACACATCTGGGGCAGTAGAGgtgatatcagtgttattcataactatatcatttcatagtatatgtctctataagactgacatgaatggtggggatcagttcatcaagtgggacttctactcttgatgcag
species | Glycine max |
transcript | GLYMA11G13330.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TTTCTCACAATGATGCTGGTACAAGTGATAACACATCTGGGGCAGTAGAG GAGGAGTTTCAGAGTAAAAGCAAACCAATTAGTATTGCCAATGCCAATAAGEST: gi|207748535|gb|GD719028.1|GD719028
genomic: TTTCTCACAATGATGCTGGTACAAGTGATAACACATCTGGGGCAGTAGAGgtgatatcag ... cttgatgcagGAGGAGTTTCAGAGTAAAAGCAAACCAATTAGTATTGCCAATGCCAATAAG
EST: TTTCTCACAATGATGCTGGTACAAGTGATAACACATCTGGGGCAGTAGAG GAGGAGTTTCAGAGTAAAAGCAAAEST: gi|192333733|gb|FK025806.1|FK025806
genomic: TTTCTCACAATGATGCTGGTACAAGTGATAACACATCTGGGGCAGTAGAGgtgatatcag ... cttgatgcagGAGGAGTTTCAGAGTAAAAGCAAA
EST: TTTCTCACAATGATGCTGGTACAAGTGATAACACATCTGGGGCAGTAGAG GAGGAGTTTCAGAGTAAAAGCAAACCAATTAGTATTGCCAATGCCAATAAGEST: gi|31561508|gb|CD487346.1|CD487346
genomic: TTTCTCACAATGATGCTGGTACAAGTGATAACACATCTGGGGCAGTAGAGgtgatatcag ... cttgatgcagGAGGAGTTTCAGAGTAAAAGCAAACCAATTAGTATTGCCAATGCCAATAAG
EST: TTTCTCACAATGATGCTGGTACAAGTGATAACACATCTGGGGCAGTAGAG GAGGAGTTTCAGAGTAAAAGCAAACCAATTAGTATTGCCAATGCCAATAAG
genomic: TTTCTCACAATGATGCTGGTACAAGTGATAACACATCTGGGGCAGTAGAGgtgatatcag ... cttgatgcagGAGGAGTTTCAGAGTAAAAGCAAACCAATTAGTATTGCCAATGCCAATAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCCCGATAACTCAAACTCGAAGATATCCTCACCAAATTACAAAAGGAGCTTTTCTCACAATGATGCTGGTACAAGTGATAACACATCTGGGGCAGTAGAGgtgatatcagtgttattcataactatatcatttcatagtatatgtctctataagactgacatgaatggtggggatcagttcatcaagtgggacttctactcttgatgcag
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