1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GCCTATGCACAAGGTCAATTTCGACGCCAAGAGCGAGTACGAGATGATTCAGAACTACAAGGTCCTTCAAGATGTCTTCAACAAACTCAAAATCACCAAGgtatcactcaacttctctctcgtcttttaatttcatccctgttattctttaattttggacgatcttgatttcagttaccgaattgttcgttgtatattttcag
species | Glycine max |
transcript | GLYMA11G05560.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AGAACTACAAGGTCCTTCAAGATGTCTTCAACAAACTCAAAATCACCAAG CACATCGAGGTCAGCAAGCTGGTGAAAGGAAGGCCACTGGATAACCTCGAGEST: gi|193712643|gb|FK650968.1|FK650968
genomic: AGAACTACAAGGTCCTTCAAGATGTCTTCAACAAACTCAAAATCACCAAGgtatcactca ... atattttcagCACATCGAGGTCAGCAAGCTGGTGAAAGGAAGGCCACTGGATAACCTCGAG
EST: CCTTCAAGATGTCTTCAACAAACTCAAAATACACCAAG CACATCGAGGTCAGCAAGCTGGTGAAAGGAAGGCCACTGGATAACCTCGAEST: gi|151397172|gb|EV267045.1|EV267045
genomic: CCTTCAAGATGTCTTCAACAAACTCAAAAT-CACCAAGgtatcactca ... atattttcagCACATCGAGGTCAGCAAGCTGGTGAAAGGAAGGCCACTGGATAACCTCGA
EST: AGAACTACAAGGTCCTTCAAGATGTCTTCAACAAACTCAAAATCACCAAG CACATCGAGGTCAGCAAGCTGGTGAAAGGAAGGCCACTGGATAACCTCGAG
genomic: AGAACTACAAGGTCCTTCAAGATGTCTTCAACAAACTCAAAATCACCAAGgtatcactca ... atattttcagCACATCGAGGTCAGCAAGCTGGTGAAAGGAAGGCCACTGGATAACCTCGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCCTATGCACAAGGTCAATTTCGACGCCAAGAGCGAGTACGAGATGATTCAGAACTACAAGGTCCTTCAAGATGTCTTCAACAAACTCAAAATCACCAAGgtatcactcaacttctctctcgtcttttaatttcatccctgttattctttaattttggacgatcttgatttcagttaccgaattgttcgttgtatattttcag
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