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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagttaacattgttgtctcctcttgtgctttacagttgtgttaaaattgtaaggtgtgtgtgtttgattcag

Basic information

species Glycine max
transcript GLYMA11G02410.2
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA11G02410.2 (Glycine max), 5'ss of exon 2
lower sequence: LOC_Os02g34460.1 (Oryza sativa), 5'ss of exon 2
ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt--taacattgttgtctcctcttgtgct--ttacag------ttgtgttaaaattgtaaggtgtgtgtgtttgattcag------------
||||| ||| |||||||||| || ||||||||||| |||||||||||||||  | |     |    |  |||  |  | | |  ||  |||||       ||| || || |    |  | |||  ||||| | ||              
ATCATCCCCAAGAAGAACCGGAATGAGATCTGCAAGTACCTCTTCCAAGgttggctcactctgctctccttgattggtttcgatctcattacaaaatggattgcgtaaacaggaaattgggtgattgttttaatccctcgtttaattgg

upper sequence: GLYMA11G02410.2 (Glycine max), 5'ss of exon 2
lower sequence: LOC_Os04g35090.1 (Oryza sativa), 5'ss of exon 2
ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagttaacattgttgtctcctcttgtgctttacagttgtgttaaaattgtaaggtgtgtg---tgtttgattcag-------------------------
||||| ||  |||||||||| || ||||||||||| |||||||||||||||| ||   |     |||  ||| |   |||  | |   | | ||  || |   |||  |     |   |||||  |  ||                         
ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGgtcagtggttc----ttg--gtccctatttgcacctcgtaatcgtactagaggcgtagagccgccgccatgtttagtggagattgttgttttaggtttgcaaaacg

upper sequence: GLYMA11G02410.2 (Glycine max), 5'ss of exon 2
lower sequence: GRMZM2G459828_T01 (Zea mays), 5'ss of exon 2
ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccg-ttagttaacattgttgtctcct--cttgtgctttacagttgtgttaaaat-tgtaaggtg-tgtgtgtttgattcag---
||||| ||| |||||||||| || ||||||||||| ||||||||| | |||  | |    ||   | |  ||    |  | || |||     ||||| |     | |   |||||     | ||  | | |    
ATCATCCCCAAGAAGAACCGCAATGAGATCTGCAAgtacctcttcaagggtatggtccactagactcgcagtagggtaacctgggctgattggttgtttcgccttctaggaggtgacagatcttcaaattatttt

upper sequence: GLYMA11G02410.2 (Glycine max), 5'ss of exon 2
lower sequence: GRMZM2G050925_T01 (Zea mays), 5'ss of exon 2
ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgt----------ccgttagttaacattgttgtctcct--cttgtgctttacagttgtgttaaaattgtaaggtgtgtgtgtttgattcag----------
||||| ||| |||||||||| || ||||||||||| ||||||||| | |||           |||  | |||  | |  ||    |  |||| | |     ||||| |     |      | |   || ||  |               
ATCATCCCCAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCAAGGgtatgcgattattcgtccgctaaactcgcagtagggtaacttgcgttggttggttgtttcgctttctaggaggggacgtcttcaaactgtttccttatta

upper sequence: GLYMA11G02410.2 (Glycine max), 5'ss of exon 2
lower sequence: AC209215.4_FGT006 (Zea mays), 5'ss of exon 2
ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgt-ccgttagttaacattgttgtctcct--cttgtgctttacagttgtgttaaaat-tgtaaggtg-tgtgtgtttgattcag-----------------
||||| ||| |||||||||| || ||||||||||| ||||||||| | |||   ||    ||   | |  ||    |  | || |||     ||||| |     | |   |||||   | | ||  | | |                  
ATCATCCCCAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCAAGGgtatggtccactagactcgcagtagggtaacctgggctgattggttgtttcgccttctaggaggtgacatatcttcaaattatttttgtattactaggag

upper sequence: GLYMA11G02410.2 (Glycine max), 5'ss of exon 2
lower sequence: GRMZM2G043737_T01 (Zea mays), 5'ss of exon 2
ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgt--tagttaacattgttgtctcct----------cttgtgctttacagttgtgttaaaat-tgtaaggtg-tgtgtgtttgattcag--------
||||| ||| |||||||||| || ||||||||||| ||||||||| | |||  ||  |  ||       | | |||            | || |||     ||||| | |   | |   |||||    || ||  | | |         
ATCATCCCCAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCAAGGgtatgtggttcttggtccactagactcgcagtagggtaacctgggctgattggttgtttcaccttctaggaggtgacaggtcttcaaattattttcgtat

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|8404306|gb|BE059940.1|BE059940
EST:     ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAATAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|14990519|gb|BI316192.1|BI316192
EST:     ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|15204011|gb|BI426708.1|BI426708
EST:     ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|4301666|gb|AI443223.1|AI443223
EST:     ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|18734269|gb|BM528086.1|BM528086
EST:     ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|21676898|gb|BQ629249.1|BQ629249
EST:     ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|22541467|gb|BU091310.1|BU091310
EST:     ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|193419203|gb|FK384855.1|FK384855
EST:     ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|10844274|gb|BF067584.1|BF067584
EST:     ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|298189969|gb|HO031634.1|HO031634
EST:     ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|15338023|gb|BI498679.1|BI498679
EST:     ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|298163410|gb|HO012143.1|HO012143
EST:     ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|298198100|gb|HO039639.1|HO039639
EST:     ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|5820037|gb|AI988243.1|AI988243
EST:     AAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: AAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|20448412|gb|BQ252536.1|BQ252536
EST:     ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|7146276|gb|AW508130.1|AW508130
EST:     ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|5606370|gb|AI900524.1|AI900524
EST:     ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|13252336|gb|BG363239.1|BG363239
EST:     ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|4314073|gb|AI461192.1|AI461192
EST:     ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|10845562|gb|BF068656.1|BF068656
EST:     ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|12774031|gb|BG238958.1|BG238958
EST:     GATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: GATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|20207847|gb|BQ133936.1|BQ133936
EST:     ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|19052687|gb|BM731354.1|BM731354
EST:     ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|207782357|gb|GD752864.1|GD752864
EST:     ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAG                         GGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|298180908|gb|HO022347.1|HO022347
EST:     ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|27424478|gb|CA935998.1|CA935998
EST:     ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|14259594|gb|BG882502.1|BG882502
EST:     ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|8284522|gb|BE022090.1|BE022090
EST:     ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|8827009|gb|BE210739.1|BE210739
EST:     ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|15338149|gb|BI498805.1|BI498805
EST:     ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|298183411|gb|HO028624.1|HO028624
EST:     ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|9900485|gb|BE609453.1|BE609453
EST:     ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
EST: gi|27423897|gb|CA935417.1|CA935417
EST:     AAAGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA
genomic: AAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagt ... tttgattcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGA

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGgtccgttagttaacattgttgtctcctcttgtgctttacagttgtgttaaaattgtaaggtgtgtgtgtttgattcag

- - - - - - AAGAAC
- - - - - - - - - - - AAGAGA
- - - - - - - - - - - - GAGATC