1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TGTTGTGGTCGGAGGCATTACTCCGACGCCTCTCGGGGAAGGCAAATCTACTACTACAGTGGGACTTTGTCAAGCTTTAGGTGCTTTTCTTGATAAAAAGgtaatcttttttttcttcttcaacatttatggcatttgataccgaactgaatctggatttgtttttttttttttttttttaatttagtcaactggtttga...
species | Glycine max |
transcript | GLYMA10G44010.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CTACTACAGTGGGACTTTGTCAAGCTTTAGGTGCTTTTCTTGATAAAAAG GTAGTTACCTGCCTTCGTCAACCATCGCAAGGACCTACTTTTGGAATTAAAEST: gi|193372864|gb|FK336598.1|FK336598
genomic: CTACTACAGTGGGACTTTGTCAAGCTTTAGGTGCTTTTCTTGATAAAAAGgtaatctttt ... tttttgttagGTAGTTACCTGCCTTCGTCAACCATCGCAAGGACCTACTTTTGGAATTAAA
EST: CTACTACAGTGGGACTTTGTCAAGCTTTAGGTGCTTTTCTTGATAAAAAG GTAGTTACCTGCCTTCGTCAACCATCGCAAGGACCTACTTTTGGAATTAAAEST: gi|13252242|gb|BG363145.1|BG363145
genomic: CTACTACAGTGGGACTTTGTCAAGCTTTAGGTGCTTTTCTTGATAAAAAGgtaatctttt ... tttttgttagGTAGTTACCTGCCTTCGTCAACCATCGCAAGGACCTACTTTTGGAATTAAA
EST: AGTGGGACTTTGTCAAGCTTTAGGTGCTTTTCTTGATAAAAAG GTAGTTACCTGCCTTCGTCAACCATCGCAAGGACCTACTTTTGGAATTAAAEST: gi|207793644|gb|GD766726.1|GD766726
genomic: AGTGGGACTTTGTCAAGCTTTAGGTGCTTTTCTTGATAAAAAGgtaatctttt ... tttttgttagGTAGTTACCTGCCTTCGTCAACCATCGCAAGGACCTACTTTTGGAATTAAA
EST: CTACTACAGTGGGACTTTGTCAAGCTTTAGGTGCTTTTCTTGATAAAAAG GTAGTTACCTGCCTTCGTCAACCATCGCAAGGACCTTACTTTTTGGAATTA
genomic: CTACTACAGTGGGACTTTGTCAAGCTTTAGGTGCTTTTCTTGATAAAAAGgtaatctttt ... tttttgttagGTAGTTACCTGCCTTCGTCAACCATCGCAAGGACCT-ACTTTT-GGAATTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGTTGTGGTCGGAGGCATTACTCCGACGCCTCTCGGGGAAGGCAAATCTACTACTACAGTGGGACTTTGTCAAGCTTTAGGTGCTTTTCTTGATAAAAAGgtaatcttttttttcttcttcaacatttatggcatttgataccgaactgaatctggatttgtttttttttttttttttttaatttagtcaactggtttga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT