1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
ATGGAATAACACTCGTATGAAGCGGATTCTTGTTGATTACATGTTGAGGATGTCATACTATGACACTGCAGTGAAACTTGCCGAAAGCAGCAACTTGCAGgtaagggatgtggtggggtggttgtatgtggatgctggcaatattttgcaccttttggtttttctgtgttatagtttgaaatgtgcattttgttttgtattccttctaacaataatatcattcatgttgttgcatcag
species | Glycine max |
transcript | GLYMA10G43910.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TGTCATACTATGACACTGCAGTGAAACTTGCCGAAAGCAGCAACTTGCAG GATCTTGTTGATATTGATGTATTCCAAGAAGCAAAAAAGGTTATCGATGCTEST: gi|192319196|gb|FK006924.1|FK006924
genomic: TGTCATACTATGACACTGCAGTGAAACTTGCCGAAAGCAGCAACTTGCAGgtaagggatg ... gttgcatcagGATCTTGTTGATATTGATGTATTCCAAGAAGCAAAAAAGGTTATCGATGCT
EST: TGTCATACTATGACACTGCAGTGAAACTTGCCGAAAGCAGCAACTTGCAG GATCTTGTTGATATTGATGTATTCCAAGAAGCAAAAAAGGTTATCGATGCTEST: gi|192319197|gb|FK006925.1|FK006925
genomic: TGTCATACTATGACACTGCAGTGAAACTTGCCGAAAGCAGCAACTTGCAGgtaagggatg ... gttgcatcagGATCTTGTTGATATTGATGTATTCCAAGAAGCAAAAAAGGTTATCGATGCT
EST: TGTCATACTATGACACTGCAGTGAAACTTGCCGAAAGCAGCAACTTGCAG GATCTTGTTGATATTGATGTATTCCAAGAAGCAAAAAAGGTTATCGATGCTEST: gi|14259206|gb|BG882114.1|BG882114
genomic: TGTCATACTATGACACTGCAGTGAAACTTGCCGAAAGCAGCAACTTGCAGgtaagggatg ... gttgcatcagGATCTTGTTGATATTGATGTATTCCAAGAAGCAAAAAAGGTTATCGATGCT
EST: TGTCATACTATGACACTGCAGTGAAACTTGCCGAAAGCAGCAACTTGCAG GATCTTGTTGATATTGATGTATTCCAAGAAGCAAAAAAGGTTATCGATGCT
genomic: TGTCATACTATGACACTGCAGTGAAACTTGCCGAAAGCAGCAACTTGCAGgtaagggatg ... gttgcatcagGATCTTGTTGATATTGATGTATTCCAAGAAGCAAAAAAGGTTATCGATGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGGAATAACACTCGTATGAAGCGGATTCTTGTTGATTACATGTTGAGGATGTCATACTATGACACTGCAGTGAAACTTGCCGAAAGCAGCAACTTGCAGgtaagggatgtggtggggtggttgtatgtggatgctggcaatattttgcaccttttggtttttctgtgttatagtttgaaatgtgcattttgttttgtattccttctaacaataatatcattcatgttgttgcatcag
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