1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TCCATGCCTGGACCTGAGACTCTACCTCTACCCCCAGATGCTTCAAGTACTTTATACGTTGAAGGTCTCCCATCTGGCAGCACGAGACGGGAAGTAGCTCgcatcctttttgttctcagatactggataggaattttatattgatacttccaactatcttgtcacttcatttatattaaattacctattttgttctcagatactgtatgggaattgtatcgtcatactttcaactgtcttgtccttaatgtcatttttag
species | Glycine max |
transcript | GLYMA10G37100.1 |
intron # | 2 |
splice site | 5' |
intron type | U12 (go to U12 genes for details) |
EST: TTTATACGTTGAAGGTCTCCCATCTGGCAGCACGAGACGGGAAGTAGCTC ATATTTTTCGCCCTTTCGTTGGATATAGAGAAGTAEST: gi|192325611|gb|FK019467.1|FK019467
genomic: TTTATACGTTGAAGGTCTCCCATCTGGCAGCACGAGACGGGAAGTAGCTCgcatcctttt ... tcatttttagATATTTTTCGCCCTTTCGTTGGATATAGAGAAGTA
EST: TTTATACGTTGAAGGTCTCCCATCTGGCAGCACGAGACGGGAAGTAGCTC ATATTTTTCGCCCTTTCGTTGGATATAGAGAAGTAAGACTTGTGAGCAAAG
genomic: TTTATACGTTGAAGGTCTCCCATCTGGCAGCACGAGACGGGAAGTAGCTCgcatcctttt ... tcatttttagATATTTTTCGCCCTTTCGTTGGATATAGAGAAGTAAGACTTGTGAGCAAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCCATGCCTGGACCTGAGACTCTACCTCTACCCCCAGATGCTTCAAGTACTTTATACGTTGAAGGTCTCCCATCTGGCAGCACGAGACGGGAAGTAGCTCgcatcctttttgttctcagatactggataggaattttatattgatacttccaactatcttgtcacttcatttatattaaattacctattttgttctcagatactgtatgggaattgtatcgtcatactttcaactgtcttgtccttaatgtcatttttag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG