1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
AAAGATAAAAGCTTCGGGAAGTCAGCAAACAGGATCCATTCGACATGGAGACAACCTTGATGCAATGAATAGCAGGAGTTTGCTGCAGgttgtttagctttcacgtgttttacagcaaaatttagcattttatttatcagtaatttttcacacctaagttctggatactaacttttccttccatcgtggacgaag
species | Glycine max |
transcript | GLYMA10G35950.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TTCGACATGGAGACAACCTTGATGCAATGAATAGCAGGAGTTTGCTGCAG A-AG---TTTCAGAGGAAAATGCCAACGGTATTCCTTTTCAACAAGCAATCEST: gi|27425358|gb|CA936878.1|CA936878
genomic: TTCGACATGGAGACAACCTTGATGCAATGAATAGCAGGAGTTTGCTGCAGgttgtttagc ... gtggacgaagACAGAAGTTTCAGAGGAAAATGCCAACGGTATTCCTTTTCAACAAGCAATC
EST: TTCGACATGGAGACAACCTTGATGCAATGAATAGCAGGAGTTTGCTGCAG A-AG---TTTCAGAGGAAAATGCCAACGGTATTCCTTTTCAACAAGCAATC
genomic: TTCGACATGGAGACAACCTTGATGCAATGAATAGCAGGAGTTTGCTGCAGgttgtttagc ... gtggacgaagACAGAAGTTTCAGAGGAAAATGCCAACGGTATTCCTTTTCAACAAGCAATC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAAGATAAAAGCTTCGGGAAGTCAGCAAACAGGATCCATTCGACATGGAGACAACCTTGATGCAATGAATAGCAGGAGTTTGCTGCAGgttgtttagctttcacgtgttttacagcaaaatttagcattttatttatcagtaatttttcacacctaagttctggatactaacttttccttccatcgtggacgaag
- - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG